Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0A   Type   Regulator
Locus tag   MHH77_RS10990 Genome accession   NZ_CP150435
Coordinates   2186415..2187218 (-) Length   267 a.a.
NCBI ID   WP_003215740.1    Uniprot ID   A0AB34QSQ5
Organism   Bacillus sp. FSL K6-2837     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context


Location: 2181415..2192218
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHH77_RS10975 (MHH77_10975) - 2183623..2183859 (+) 237 WP_144462757.1 DUF2627 domain-containing protein -
  MHH77_RS10980 (MHH77_10980) - 2183894..2184631 (-) 738 WP_339163055.1 glycerophosphodiester phosphodiesterase -
  MHH77_RS10985 (MHH77_10985) - 2184857..2185957 (-) 1101 WP_058014715.1 Rap family tetratricopeptide repeat protein -
  MHH77_RS10990 (MHH77_10990) spo0A 2186415..2187218 (-) 804 WP_003215740.1 sporulation transcription factor Spo0A Regulator
  MHH77_RS10995 (MHH77_10995) spoIVB 2187504..2188781 (-) 1278 WP_339163059.1 SpoIVB peptidase -
  MHH77_RS11000 (MHH77_11000) recN 2188980..2190716 (-) 1737 WP_061408509.1 DNA repair protein RecN Machinery gene
  MHH77_RS11005 (MHH77_11005) argR 2190750..2191199 (-) 450 WP_058014712.1 transcriptional regulator ArgR -
  MHH77_RS11010 (MHH77_11010) - 2191359..2192213 (-) 855 WP_106067130.1 TlyA family RNA methyltransferase -

Sequence


Protein


Download         Length: 267 a.a.        Molecular weight: 29946.45 Da        Isoelectric Point: 6.3914

>NTDB_id=970297 MHH77_RS10990 WP_003215740.1 2186415..2187218(-) (spo0A) [Bacillus sp. FSL K6-2837]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNDMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVTHRSSSIQNSVLRNKPEPKRRNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=970297 MHH77_RS10990 WP_003215740.1 2186415..2187218(-) (spo0A) [Bacillus sp. FSL K6-2837]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAGCTTGTTGGCCTTTTGACAGAGTATATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGTCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGATATTATCATGCCTCATTTAGATGGCCTTGCTGTACTGGAACGCCTCCGTGAAAACAATGACATGACCAAACAG
CCAAGTGTGATTATGCTAACGGCGTTTGGACAAGAAGATGTCACGAAAAAAGCAGTTGATTTAGGGGCATCCTATTTCAT
CTTAAAGCCATTTGATATGGAAAACCTAGTCGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTCACCCATCGAT
CTTCATCTATCCAAAACAGTGTCCTTCGAAACAAACCTGAACCGAAACGCAGAAACTTAGATGCGAGCATTACGACGATT
ATTCATGAGATTGGTGTACCTGCTCATATTAAAGGTTACTTATACTTAAGAGAAGCCATTTCGATGGTGTACAATGACAT
CGAGCTTCTCGGAAGCATCACAAAAGTGTTGTATCCAGACATCGCGAAGAAATTTAACACGACCGCGAGCAGGGTCGAAC
GAGCAATTCGTCATGCGATTGAAGTGGCTTGGAGTAGAGGAAACATCGACTCCATTTCCTCACTCTTTGGTTATACAGTC
AGCATGTCTAAAGCAAAACCAACCAATTCTGAATTTATCGCAATGGTGGCTGACCGTCTCCGCTTGGAGCATCGAGCTAG
CTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884


Multiple sequence alignment