Detailed information    

insolico Bioinformatically predicted

Overview


Name   degS   Type   Regulator
Locus tag   MHB62_RS18380 Genome accession   NZ_CP150278
Coordinates   3526248..3527405 (-) Length   385 a.a.
NCBI ID   WP_003227983.1    Uniprot ID   A0A199WDV9
Organism   Bacillus sp. FSL K6-0255     
Function   phosphorylation of DegU (predicted from homology)   
Competence regulation

Genomic Context


Location: 3521248..3532405
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHB62_RS18350 (MHB62_18345) - 3521502..3521921 (-) 420 WP_003227995.1 TIGR03826 family flagellar region protein -
  MHB62_RS18355 (MHB62_18350) comFC 3521994..3522716 (-) 723 WP_014481051.1 comF operon protein ComFC Machinery gene
  MHB62_RS18360 (MHB62_18355) comFB 3522680..3522976 (-) 297 WP_015483764.1 late competence protein ComFB -
  MHB62_RS18365 (MHB62_18360) comFA 3523036..3524427 (-) 1392 WP_089172669.1 ATP-dependent helicase ComFA Machinery gene
  MHB62_RS18370 (MHB62_18365) - 3524533..3525378 (-) 846 WP_003244125.1 DegV family protein -
  MHB62_RS18375 (MHB62_18370) degU 3525476..3526165 (-) 690 WP_003219701.1 two-component system response regulator DegU Regulator
  MHB62_RS18380 (MHB62_18375) degS 3526248..3527405 (-) 1158 WP_003227983.1 two-component sensor histidine kinase DegS Regulator
  MHB62_RS18385 (MHB62_18380) - 3527622..3528275 (+) 654 WP_003227979.1 YigZ family protein -
  MHB62_RS18390 (MHB62_18385) tagV 3528275..3529450 (+) 1176 WP_015714802.1 polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagV -
  MHB62_RS18395 (MHB62_18390) - 3529523..3530599 (-) 1077 WP_003227975.1 MraY family glycosyltransferase -
  MHB62_RS18400 (MHB62_18395) tuaH 3530744..3531937 (-) 1194 WP_080287643.1 teichuronic acid biosynthesis protein TuaH -

Sequence


Protein


Download         Length: 385 a.a.        Molecular weight: 44957.76 Da        Isoelectric Point: 6.2957

>NTDB_id=969292 MHB62_RS18380 WP_003227983.1 3526248..3527405(-) (degS) [Bacillus sp. FSL K6-0255]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide


Download         Length: 1158 bp        

>NTDB_id=969292 MHB62_RS18380 WP_003227983.1 3526248..3527405(-) (degS) [Bacillus sp. FSL K6-0255]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAAGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TGTATGAAGTGATTGAGCTTGGCGATAAACTTGAAGTGCAAACTCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGT
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAATTGCGCGAACGGCGGGACGATTTGGAGCGCAGATTGCTAGGGCTTCAGGAAATCATTGAGC
GGTCAGAATCATTAGTAAGCCAAATTACAGTTGTGCTCAACTACTTGAATCAGGATTTGCGCGAAGTTGGACTGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTCGGCTTAAGAATCATTGAGGCGCAGGAAGAAGAGCGAAAAAGAGTCTCAAGAGA
AATCCATGACGGACCCGCTCAAATGCTGGCGAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GCGCAGAGGACGGATTCCAAGAAATTAAAAATCTACGCCAAAATGTTCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATTGGAGAAACAGAGGATCAGAGGCTAGCGCCTCAGTTTGAGGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAGATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACGATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A199WDV9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degS Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment