Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | OO778_RS01690 | Genome accession | NZ_AP026765 |
| Coordinates | 356590..357105 (+) | Length | 171 a.a. |
| NCBI ID | WP_005395715.1 | Uniprot ID | A0AAE4S8V9 |
| Organism | Vibrio sp. STUT-A16 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 351590..362105
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO778_RS01670 (VspSTUT16_02820) | - | 351734..354295 (-) | 2562 | WP_264910641.1 | PBP1A family penicillin-binding protein | - |
| OO778_RS01675 (VspSTUT16_02830) | pilM | 354439..355455 (+) | 1017 | WP_164667087.1 | type IV pilus assembly protein PilM | Machinery gene |
| OO778_RS01680 (VspSTUT16_02840) | pilN | 355439..356014 (+) | 576 | WP_074191323.1 | PilN domain-containing protein | Machinery gene |
| OO778_RS01685 (VspSTUT16_02850) | pilO | 356007..356600 (+) | 594 | WP_012841351.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| OO778_RS01690 (VspSTUT16_02860) | pilP | 356590..357105 (+) | 516 | WP_005395715.1 | pilus assembly protein PilP | Machinery gene |
| OO778_RS01695 (VspSTUT16_02870) | pilQ | 357137..358879 (+) | 1743 | WP_080955983.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| OO778_RS01700 (VspSTUT16_02880) | aroK | 359067..359585 (+) | 519 | WP_005381319.1 | shikimate kinase AroK | - |
| OO778_RS01705 (VspSTUT16_02890) | aroB | 359618..360718 (+) | 1101 | WP_258614184.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19011.18 Da Isoelectric Point: 10.5314
>NTDB_id=96836 OO778_RS01690 WP_005395715.1 356590..357105(+) (pilP) [Vibrio sp. STUT-A16]
MTSKHLLLVLMGSLLLGCQANDESLTDFIRGVESQARRDVEKLKPADKYVAVTYAPEVQRAPFELPKEATIATQPVARKD
CWQPPSRRRTGKLEKFPLSQLRLKGVMGMGNTVSGLVQAPNGTVYKVKPGQYLGRNNGKVTHVSHSYLLINETLPDGLGC
WQKRKVKLALR
MTSKHLLLVLMGSLLLGCQANDESLTDFIRGVESQARRDVEKLKPADKYVAVTYAPEVQRAPFELPKEATIATQPVARKD
CWQPPSRRRTGKLEKFPLSQLRLKGVMGMGNTVSGLVQAPNGTVYKVKPGQYLGRNNGKVTHVSHSYLLINETLPDGLGC
WQKRKVKLALR
Nucleotide
Download Length: 516 bp
>NTDB_id=96836 OO778_RS01690 WP_005395715.1 356590..357105(+) (pilP) [Vibrio sp. STUT-A16]
ATGACAAGTAAGCATTTGTTACTGGTACTGATGGGGTCTCTGCTACTTGGATGTCAGGCGAATGATGAGTCATTAACGGA
TTTTATTCGAGGGGTGGAAAGTCAGGCGCGTCGAGATGTCGAGAAACTTAAGCCTGCAGATAAGTATGTTGCCGTCACGT
ACGCACCTGAAGTACAGCGTGCGCCCTTTGAGTTACCAAAAGAAGCCACGATCGCCACTCAGCCCGTTGCAAGAAAAGAT
TGCTGGCAACCGCCTTCAAGAAGGCGCACTGGCAAATTAGAAAAATTCCCATTAAGCCAATTACGTTTGAAAGGAGTTAT
GGGCATGGGTAATACGGTTTCTGGTCTCGTTCAGGCACCCAATGGCACCGTTTATAAAGTGAAGCCGGGGCAATACCTCG
GACGCAACAATGGCAAAGTGACCCACGTCAGCCATTCCTATTTGTTAATTAATGAAACGTTGCCCGACGGCTTAGGGTGT
TGGCAGAAGCGTAAAGTTAAGTTGGCTTTGAGATAG
ATGACAAGTAAGCATTTGTTACTGGTACTGATGGGGTCTCTGCTACTTGGATGTCAGGCGAATGATGAGTCATTAACGGA
TTTTATTCGAGGGGTGGAAAGTCAGGCGCGTCGAGATGTCGAGAAACTTAAGCCTGCAGATAAGTATGTTGCCGTCACGT
ACGCACCTGAAGTACAGCGTGCGCCCTTTGAGTTACCAAAAGAAGCCACGATCGCCACTCAGCCCGTTGCAAGAAAAGAT
TGCTGGCAACCGCCTTCAAGAAGGCGCACTGGCAAATTAGAAAAATTCCCATTAAGCCAATTACGTTTGAAAGGAGTTAT
GGGCATGGGTAATACGGTTTCTGGTCTCGTTCAGGCACCCAATGGCACCGTTTATAAAGTGAAGCCGGGGCAATACCTCG
GACGCAACAATGGCAAAGTGACCCACGTCAGCCATTCCTATTTGTTAATTAATGAAACGTTGCCCGACGGCTTAGGGTGT
TGGCAGAAGCGTAAAGTTAAGTTGGCTTTGAGATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Vibrio campbellii strain DS40M4 |
85.38 |
100 |
0.854 |
| pilP | Vibrio cholerae strain A1552 |
56.977 |
100 |
0.573 |