Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGC   Type   Machinery gene
Locus tag   MKX71_RS12310 Genome accession   NZ_CP150256
Coordinates   2416663..2416959 (-) Length   98 a.a.
NCBI ID   WP_003230162.1    Uniprot ID   A0A809FGR8
Organism   Bacillus sp. FSL M8-0071     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2411663..2421959
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKX71_RS12265 (MKX71_12265) tasA 2412070..2412855 (-) 786 WP_014664586.1 biofilm matrix protein TasA -
  MKX71_RS12270 (MKX71_12270) - 2412919..2413491 (-) 573 WP_003230181.1 signal peptidase I -
  MKX71_RS12275 (MKX71_12275) tapA 2413475..2414236 (-) 762 WP_029726724.1 amyloid fiber anchoring/assembly protein TapA -
  MKX71_RS12280 (MKX71_12280) - 2414508..2414834 (+) 327 WP_003246051.1 YqzG/YhdC family protein -
  MKX71_RS12285 (MKX71_12285) - 2414876..2415055 (-) 180 WP_029726723.1 YqzE family protein -
  MKX71_RS12290 (MKX71_12290) comGG 2415127..2415501 (-) 375 WP_014480253.1 ComG operon protein ComGG Machinery gene
  MKX71_RS12295 (MKX71_12295) comGF 2415502..2415885 (-) 384 WP_032726158.1 ComG operon protein ComGF Machinery gene
  MKX71_RS12300 (MKX71_12300) comGE 2415911..2416258 (-) 348 WP_014480255.1 ComG operon protein 5 Machinery gene
  MKX71_RS12305 (MKX71_12305) comGD 2416242..2416673 (-) 432 WP_014480256.1 comG operon protein ComGD Machinery gene
  MKX71_RS12310 (MKX71_12310) comGC 2416663..2416959 (-) 297 WP_003230162.1 comG operon protein ComGC Machinery gene
  MKX71_RS12315 (MKX71_12315) comGB 2416973..2418010 (-) 1038 WP_029317912.1 comG operon protein ComGB Machinery gene
  MKX71_RS12320 (MKX71_12320) comGA 2417997..2419067 (-) 1071 WP_069322755.1 competence protein ComGA Machinery gene
  MKX71_RS12325 (MKX71_12325) - 2419279..2419401 (-) 123 Protein_2377 hypothetical protein -
  MKX71_RS12330 (MKX71_12330) corA 2419478..2420431 (-) 954 WP_015483432.1 magnesium transporter CorA -
  MKX71_RS12335 (MKX71_12335) - 2420574..2421902 (+) 1329 WP_003230150.1 hemolysin family protein -

Sequence

Protein


Download         Length: 98 a.a.        Molecular weight: 10849.74 Da        Isoelectric Point: 6.7083

>NTDB_id=968156 MKX71_RS12310 WP_003230162.1 2416663..2416959(-) (comGC) [Bacillus sp. FSL M8-0071]
MNEKGFTLVEMLIVLFIISILLLITIPNVTKHNQTIQKKGCEGLQNMVKAQMTAFELDHEGQTPSLADLQSEGYVKKDAV
CPNGKRIIITGGEVKVEH

Nucleotide


Download         Length: 297 bp        

>NTDB_id=968156 MKX71_RS12310 WP_003230162.1 2416663..2416959(-) (comGC) [Bacillus sp. FSL M8-0071]
ATGAATGAGAAAGGATTTACACTTGTTGAAATGTTAATCGTGCTCTTTATTATTTCGATTTTGCTTTTAATTACGATACC
GAACGTCACGAAACATAATCAAACCATTCAAAAAAAGGGCTGTGAAGGCTTACAAAACATGGTTAAGGCACAAATGACTG
CATTTGAGCTTGATCATGAAGGACAAACTCCGAGCCTTGCCGATTTACAGTCAGAGGGCTATGTGAAAAAGGATGCTGTC
TGTCCAAATGGTAAGCGCATTATCATCACCGGCGGAGAAGTTAAGGTTGAACATTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A809FGR8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGC Bacillus subtilis subsp. subtilis str. 168

100

100

1
  comGC Staphylococcus aureus MW2

41.304

93.878

0.388
  comGC Staphylococcus aureus N315

41.304

93.878

0.388
  comYC Streptococcus suis isolate S10

49.333

76.531

0.378

Multiple sequence alignment