Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | MKX71_RS12260 | Genome accession | NZ_CP150256 |
| Coordinates | 2411642..2411977 (+) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus sp. FSL M8-0071 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2406642..2416977
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MKX71_RS12240 (MKX71_12240) | gcvT | 2407235..2408323 (-) | 1089 | WP_339231175.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| MKX71_RS12245 (MKX71_12245) | - | 2408765..2410438 (+) | 1674 | WP_029726726.1 | SNF2-related protein | - |
| MKX71_RS12250 (MKX71_12250) | - | 2410459..2411253 (+) | 795 | WP_003230200.1 | YqhG family protein | - |
| MKX71_RS12255 (MKX71_12255) | sinI | 2411435..2411608 (+) | 174 | WP_003230187.1 | anti-repressor SinI family protein | Regulator |
| MKX71_RS12260 (MKX71_12260) | sinR | 2411642..2411977 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| MKX71_RS12265 (MKX71_12265) | tasA | 2412070..2412855 (-) | 786 | WP_014664586.1 | biofilm matrix protein TasA | - |
| MKX71_RS12270 (MKX71_12270) | - | 2412919..2413491 (-) | 573 | WP_003230181.1 | signal peptidase I | - |
| MKX71_RS12275 (MKX71_12275) | tapA | 2413475..2414236 (-) | 762 | WP_029726724.1 | amyloid fiber anchoring/assembly protein TapA | - |
| MKX71_RS12280 (MKX71_12280) | - | 2414508..2414834 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| MKX71_RS12285 (MKX71_12285) | - | 2414876..2415055 (-) | 180 | WP_029726723.1 | YqzE family protein | - |
| MKX71_RS12290 (MKX71_12290) | comGG | 2415127..2415501 (-) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| MKX71_RS12295 (MKX71_12295) | comGF | 2415502..2415885 (-) | 384 | WP_032726158.1 | ComG operon protein ComGF | Machinery gene |
| MKX71_RS12300 (MKX71_12300) | comGE | 2415911..2416258 (-) | 348 | WP_014480255.1 | ComG operon protein 5 | Machinery gene |
| MKX71_RS12305 (MKX71_12305) | comGD | 2416242..2416673 (-) | 432 | WP_014480256.1 | comG operon protein ComGD | Machinery gene |
| MKX71_RS12310 (MKX71_12310) | comGC | 2416663..2416959 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=968151 MKX71_RS12260 WP_003226345.1 2411642..2411977(+) (sinR) [Bacillus sp. FSL M8-0071]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=968151 MKX71_RS12260 WP_003226345.1 2411642..2411977(+) (sinR) [Bacillus sp. FSL M8-0071]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |