Detailed information NTG0967239

Bioinformatically predicted

Overview

• Name: scnR
• Type: Regulator
• Locus tag: MKY01_RS02240
• Genome accession: NZ_CP150237
• Coordinates: 468464..469177 (+)
• Length: 237 a.a.
• NCBI ID: WP_339285200.1
• Uniprot ID: -
• Organism: Paenibacillus sp. FSL R5-0486
• Function: regulate comX expression (predicted from homology) Competence regulation

Genomic Context

Location: 463464..474177

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MKY01_RS02215 (MKY01_02215)	-	464172..465428 (+)	1257	WP_339285198.1	DUF445 domain-containing protein	-
MKY01_RS02220 (MKY01_02220)	-	465514..465867 (-)	354	WP_036616662.1	YxeA family protein	-
MKY01_RS02225 (MKY01_02225)	-	465897..466628 (-)	732	WP_036673135.1	ABC transporter permease	-
MKY01_RS02230 (MKY01_02230)	-	466641..467390 (-)	750	WP_036673138.1	ABC transporter permease	-
MKY01_RS02235 (MKY01_02235)	-	467390..468307 (-)	918	WP_036616824.1	ABC transporter ATP-binding protein	-
MKY01_RS02240 (MKY01_02240)	scnR	468464..469177 (+)	714	WP_339285200.1	response regulator transcription factor	Regulator
MKY01_RS02245 (MKY01_02245)	-	469177..470559 (+)	1383	WP_036616670.1	HAMP domain-containing sensor histidine kinase	-
MKY01_RS02250 (MKY01_02250)	-	470836..471018 (+)	183	WP_036616672.1	type A2 lanthipeptide	-

Sequence

Protein

• Length: 237 a.a.
• Molecular weight: 27049.50 Da
• Isoelectric Point: 5.2460

>NTDB_id=967239 MKY01_RS02240 WP_339285200.1 468464..469177(+) (scnR) [Paenibacillus sp. FSL R5-0486]
MELLKNKKILIVDDEPEIREMIERFLRKEGFFRIYTAGNFVNALAVCRLEKPDAAILDVMLPDGDGFSLLSSIRSFSDMP
VLFLSARGEDEDRLLGLGLGADDYMVKPFLPRELILRLMAILKRVYASNTVERLPVFRLGGQTIDLESAVVQRTDRELPL
TAKEHAILIKLYENQGRIVTSDALCQAVWGDESYGYENTLMVHVRRIREKIEEDPSKPVFLLTVRGLGYKLMVQESR

Nucleotide

• Length: 714 bp

>NTDB_id=967239 MKY01_RS02240 WP_339285200.1 468464..469177(+) (scnR) [Paenibacillus sp. FSL R5-0486]
ATGGAATTATTGAAGAATAAGAAAATATTGATCGTAGATGATGAGCCCGAAATACGGGAAATGATTGAACGTTTTTTACG
GAAAGAAGGTTTTTTCCGGATCTATACGGCTGGTAACTTCGTGAATGCTTTGGCGGTATGCAGACTTGAAAAGCCGGATG
CAGCTATTCTGGATGTGATGCTTCCGGATGGAGATGGGTTCTCTTTGCTCTCTTCGATCCGGTCATTCTCGGACATGCCT
GTTCTGTTCCTGTCTGCACGTGGTGAAGATGAGGATCGACTGCTCGGTCTGGGGCTTGGAGCAGATGATTATATGGTCAA
GCCCTTTCTGCCAAGAGAGTTGATTCTCCGGCTTATGGCTATTCTGAAGCGGGTATATGCCTCCAATACGGTGGAGAGAT
TGCCTGTATTCCGTTTGGGTGGACAAACTATTGATCTGGAGAGCGCTGTTGTACAGAGGACAGACAGGGAGCTTCCGTTG
ACAGCTAAGGAGCATGCCATACTAATCAAGTTGTATGAGAATCAGGGCCGGATTGTAACCAGTGATGCCTTGTGTCAAGC
TGTCTGGGGAGACGAGAGTTATGGGTATGAGAATACCCTGATGGTGCATGTTCGGCGAATCCGGGAGAAGATTGAGGAAG
ACCCATCCAAACCAGTATTTCTGCTGACGGTACGGGGACTTGGTTATAAATTGATGGTTCAGGAGTCTAGGTAA

Domains

Predicted by InterproScan.

• Transcriptional regulatory protein, C terminal (Trans_reg_C) (156-231)

• Response regulator receiver domain (Response_reg) (9-117)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
scnR	Streptococcus mutans UA159	50.218	96.624	0.485
micA	Streptococcus pneumoniae Cp1015	40.87	97.046	0.397
vicR	Streptococcus mutans UA159	40.175	96.624	0.388