Detailed information NTG0966242

Bioinformatically predicted

Overview

• Name: scnR
• Type: Regulator
• Locus tag: MKY59_RS02075
• Genome accession: NZ_CP150203
• Coordinates: 431083..431799 (+)
• Length: 238 a.a.
• NCBI ID: WP_339275729.1
• Uniprot ID: -
• Organism: Paenibacillus sp. FSL W8-0426
• Function: regulate comX expression (predicted from homology) Competence regulation

Genomic Context

Location: 426083..436799

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MKY59_RS02045 (MKY59_02045)	-	426244..427524 (+)	1281	WP_236417715.1	hypothetical protein	-
MKY59_RS02050 (MKY59_02050)	-	427576..427848 (+)	273	WP_236417714.1	hypothetical protein	-
MKY59_RS02055 (MKY59_02055)	-	428012..428365 (-)	354	WP_236417713.1	YxeA family protein	-
MKY59_RS02060 (MKY59_02060)	-	428403..429134 (-)	732	WP_339275727.1	ABC transporter permease	-
MKY59_RS02065 (MKY59_02065)	-	429147..429899 (-)	753	WP_339278304.1	ABC transporter permease	-
MKY59_RS02070 (MKY59_02070)	-	429896..430813 (-)	918	WP_236417711.1	ABC transporter ATP-binding protein	-
MKY59_RS02075 (MKY59_02075)	scnR	431083..431799 (+)	717	WP_339275729.1	response regulator transcription factor	Regulator
MKY59_RS02080 (MKY59_02080)	-	431799..433184 (+)	1386	WP_339275731.1	HAMP domain-containing sensor histidine kinase	-
MKY59_RS02085 (MKY59_02085)	-	433535..433717 (+)	183	WP_236417704.1	type A2 lanthipeptide	-

Sequence

Protein

• Length: 238 a.a.
• Molecular weight: 27052.41 Da
• Isoelectric Point: 5.0694

>NTDB_id=966242 MKY59_RS02075 WP_339275729.1 431083..431799(+) (scnR) [Paenibacillus sp. FSL W8-0426]
MDTMKNKKILIVDDEPEIREMIERFLRKEGFFRVYTADNFANALSVCRMEKPDAAILDVMLPDGDGFSLLSSIRSFSDMP
VLFLSARGEDEDRLLGLGLGADDYMVKPFLPRELILRLMAILKRVYAAPVVERLPVFRLGSQVIDLESATVQRGDSEHPL
TAKEHAILVKLYENQGRIVTSDALCQAVWGDESFGYENTLMVHVRRIREKIEEDPSKPMYLLTVRGLGYKLLAVQEAR

Nucleotide

• Length: 717 bp

>NTDB_id=966242 MKY59_RS02075 WP_339275729.1 431083..431799(+) (scnR) [Paenibacillus sp. FSL W8-0426]
TTGGATACAATGAAGAACAAAAAAATATTGATCGTGGACGATGAACCCGAAATACGGGAGATGATTGAACGGTTTTTGCG
AAAAGAAGGTTTTTTTCGGGTATACACGGCAGACAACTTTGCCAATGCACTCTCGGTATGCAGGATGGAAAAGCCGGATG
CCGCGATTCTGGACGTGATGCTTCCGGACGGAGACGGTTTTTCCCTGCTCTCGTCCATTCGCTCATTCTCGGATATGCCT
GTATTGTTCTTGTCGGCCCGAGGCGAAGATGAGGATCGATTGCTGGGCCTTGGCTTGGGCGCGGACGATTACATGGTAAA
GCCCTTCTTGCCGAGAGAGTTGATTTTGCGGCTAATGGCTATTTTGAAACGGGTATACGCGGCACCGGTCGTGGAAAGAT
TGCCTGTGTTTCGCCTCGGTTCGCAAGTCATCGATTTGGAAAGCGCAACGGTGCAAAGGGGGGATAGCGAGCATCCCCTG
ACGGCCAAGGAGCATGCCATTCTGGTCAAGCTGTACGAGAATCAGGGCCGAATCGTAACGAGCGATGCACTATGCCAGGC
AGTCTGGGGGGATGAAAGCTTCGGATATGAAAACACGCTGATGGTTCATGTGCGCCGCATCCGGGAGAAGATTGAGGAGG
ACCCGTCCAAGCCGATGTATTTGCTGACCGTGCGGGGGCTGGGGTATAAGCTGCTCGCTGTTCAGGAGGCGCGTTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (9-117)

• Transcriptional regulatory protein, C terminal (Trans_reg_C) (157-231)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
scnR	Streptococcus mutans UA159	50.661	95.378	0.483
micA	Streptococcus pneumoniae Cp1015	42.544	95.798	0.408
vicR	Streptococcus mutans UA159	41.048	96.218	0.395