Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   NYE32_RS07985 Genome accession   NZ_CP150201
Coordinates   1766288..1767325 (-) Length   345 a.a.
NCBI ID   WP_060972582.1    Uniprot ID   A0A6N3BHT9
Organism   Streptococcus sp. FSL R7-0248     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1761288..1772325
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE32_RS07960 (NYE32_07960) ilvD 1761521..1763224 (-) 1704 WP_060972679.1 dihydroxy-acid dehydratase -
  NYE32_RS07965 (NYE32_07965) - 1763352..1764533 (+) 1182 WP_060972584.1 NAD(P)/FAD-dependent oxidoreductase -
  NYE32_RS07975 (NYE32_07975) trmB 1764788..1765429 (-) 642 WP_060972583.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  NYE32_RS07980 (NYE32_07980) - 1765439..1766230 (-) 792 WP_002884270.1 phosphotransferase family protein -
  NYE32_RS07985 (NYE32_07985) pptB 1766288..1767325 (-) 1038 WP_060972582.1 ABC transporter permease Regulator
  NYE32_RS07990 (NYE32_07990) pptA 1767322..1768053 (-) 732 WP_060972581.1 ABC transporter ATP-binding protein Regulator
  NYE32_RS07995 (NYE32_07995) - 1768118..1768537 (+) 420 WP_037599159.1 HIT family protein -
  NYE32_RS08000 (NYE32_08000) - 1768534..1768833 (+) 300 WP_060972580.1 hypothetical protein -
  NYE32_RS08005 (NYE32_08005) - 1769014..1769181 (-) 168 WP_192573950.1 hypothetical protein -
  NYE32_RS08010 (NYE32_08010) - 1769756..1770374 (-) 619 Protein_1537 DUF4230 domain-containing protein -
  NYE32_RS08015 (NYE32_08015) - 1770392..1770517 (-) 126 WP_002884447.1 hypothetical protein -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 39932.42 Da        Isoelectric Point: 10.5384

>NTDB_id=966184 NYE32_RS07985 WP_060972582.1 1766288..1767325(-) (pptB) [Streptococcus sp. FSL R7-0248]
MIAKLFKERSKRFNARCAKYSRYVFNDHFILVLLFLLGFVLVQYSQLLKHFPKNPWAIILGLLVLCLLLPFWGNIATYLE
PADKHYLLVKEEEVLDHVKKATGRAFRFWVIVQTLIFILVIPLFLALGLPVWGVILVAVAMAILKYVIFQKKAQPFYKQS
GLNWTEAIAGENKRQQSILKFFSLFTNVKGITSSVKRRAYLDGILKRTKKDKENTWYNLYLRAFLRSGDYFALSLRLFAL
TLLVIFLVPEKWLAMVLVVVFDYLLLFQLTALKSHFAYQRMANLMPVGKDMQVSNLKHLITQIVLVLTLVQAICLFDLKF
SLILVGIMLVLSLVYLPAKLKKMID

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=966184 NYE32_RS07985 WP_060972582.1 1766288..1767325(-) (pptB) [Streptococcus sp. FSL R7-0248]
ATGATAGCTAAGCTATTTAAGGAGCGTAGCAAGCGATTCAATGCCCGCTGTGCTAAGTATAGCCGCTACGTCTTTAATGA
TCACTTTATCTTGGTTCTTCTCTTTCTGCTAGGTTTTGTCTTGGTTCAGTATAGCCAGTTGCTGAAGCATTTTCCAAAAA
ATCCGTGGGCAATCATTCTTGGCCTGCTTGTGCTTTGTCTGTTATTACCTTTCTGGGGGAATATTGCGACTTATCTAGAA
CCTGCGGACAAGCACTACCTTTTGGTTAAGGAAGAAGAGGTGCTAGACCATGTTAAGAAGGCAACGGGGCGTGCTTTTAG
ATTTTGGGTAATCGTACAAACCCTGATTTTTATTTTGGTTATTCCTCTCTTTTTAGCCTTGGGACTTCCAGTTTGGGGAG
TTATCCTTGTAGCTGTGGCTATGGCTATTCTTAAGTATGTTATTTTCCAGAAAAAGGCTCAACCTTTTTATAAGCAGTCT
GGACTGAATTGGACTGAAGCTATTGCAGGAGAAAATAAGCGTCAACAATCGATCTTGAAGTTCTTTTCACTCTTTACCAA
TGTTAAAGGGATTACGTCGAGTGTTAAACGTCGTGCCTATTTGGATGGTATTCTCAAACGTACAAAGAAAGACAAGGAAA
ATACCTGGTATAATCTTTACCTAAGAGCCTTCTTGCGTTCTGGAGATTACTTTGCCCTTAGCCTACGCCTTTTTGCCCTA
ACGCTTTTAGTTATCTTTTTGGTTCCTGAAAAATGGCTGGCTATGGTGCTTGTGGTTGTTTTTGACTACCTCTTGCTCTT
CCAGCTCACAGCGCTAAAATCACACTTTGCTTATCAGAGAATGGCTAACCTTATGCCAGTTGGAAAAGACATGCAGGTGA
GCAATCTTAAGCACTTGATTACTCAGATTGTACTTGTGCTGACTCTGGTCCAGGCTATTTGCCTCTTCGATCTTAAGTTT
AGCCTGATTTTGGTTGGAATTATGCTAGTTTTGAGCCTTGTTTACCTACCAGCCAAGCTTAAGAAGATGATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6N3BHT9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus salivarius strain HSISS4

98.256

99.71

0.98

  pptB Streptococcus thermophilus LMD-9

92.151

99.71

0.919


Multiple sequence alignment