Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   NYE32_RS07990 Genome accession   NZ_CP150201
Coordinates   1767322..1768053 (-) Length   243 a.a.
NCBI ID   WP_060972581.1    Uniprot ID   A0A6N3BCD8
Organism   Streptococcus sp. FSL R7-0248     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1762322..1773053
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE32_RS07965 (NYE32_07965) - 1763352..1764533 (+) 1182 WP_060972584.1 NAD(P)/FAD-dependent oxidoreductase -
  NYE32_RS07975 (NYE32_07975) trmB 1764788..1765429 (-) 642 WP_060972583.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  NYE32_RS07980 (NYE32_07980) - 1765439..1766230 (-) 792 WP_002884270.1 phosphotransferase family protein -
  NYE32_RS07985 (NYE32_07985) pptB 1766288..1767325 (-) 1038 WP_060972582.1 ABC transporter permease Regulator
  NYE32_RS07990 (NYE32_07990) pptA 1767322..1768053 (-) 732 WP_060972581.1 ABC transporter ATP-binding protein Regulator
  NYE32_RS07995 (NYE32_07995) - 1768118..1768537 (+) 420 WP_037599159.1 HIT family protein -
  NYE32_RS08000 (NYE32_08000) - 1768534..1768833 (+) 300 WP_060972580.1 hypothetical protein -
  NYE32_RS08005 (NYE32_08005) - 1769014..1769181 (-) 168 WP_192573950.1 hypothetical protein -
  NYE32_RS08010 (NYE32_08010) - 1769756..1770374 (-) 619 Protein_1537 DUF4230 domain-containing protein -
  NYE32_RS08015 (NYE32_08015) - 1770392..1770517 (-) 126 WP_002884447.1 hypothetical protein -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26737.99 Da        Isoelectric Point: 4.4285

>NTDB_id=966185 NYE32_RS07990 WP_060972581.1 1767322..1768053(-) (pptA) [Streptococcus sp. FSL R7-0248]
MLKLEKVTGGYANIPVLKDVTFEVADGELVGLIGLNGAGKSTTINEIIGLLTPYGGQIAIDGLTIQQDPASYRQKIGYIP
ETPSLYEELTLREHLETVLMAYGLDVTEGMARADKYLKLFRLDEKLDWFPTQFSKGMKQKVMIICAFIVGPSLLIVDEPF
LGLDPLAISDLIELLAEEKANGKAILMSTHVLDSAEKMCERFVILHHGQVLAQGTLEELRETFGDSSASLNDIYMQLTKG
ELS

Nucleotide


Download         Length: 732 bp        

>NTDB_id=966185 NYE32_RS07990 WP_060972581.1 1767322..1768053(-) (pptA) [Streptococcus sp. FSL R7-0248]
ATGCTTAAATTAGAAAAGGTGACGGGTGGTTACGCTAATATTCCCGTCCTAAAAGATGTGACTTTTGAGGTGGCTGATGG
TGAATTGGTTGGTCTCATTGGTCTTAATGGTGCTGGGAAATCAACAACAATTAACGAGATTATTGGTCTCTTAACACCTT
ATGGGGGACAGATTGCTATTGATGGGTTAACTATTCAACAAGATCCAGCTAGCTATCGTCAGAAGATTGGCTATATTCCT
GAAACGCCAAGTCTCTATGAAGAGTTGACGCTTCGTGAACATTTGGAAACGGTGTTGATGGCCTATGGTCTTGATGTGAC
TGAGGGGATGGCACGTGCGGACAAGTACCTCAAACTCTTTCGCTTAGATGAAAAGTTAGATTGGTTCCCGACTCAGTTTT
CAAAGGGAATGAAGCAGAAGGTCATGATTATCTGTGCCTTTATTGTTGGTCCAAGTCTTCTCATTGTTGATGAGCCCTTC
CTAGGTTTGGATCCCTTGGCGATTTCGGACTTGATTGAGCTTTTGGCTGAGGAAAAAGCGAATGGTAAGGCTATTCTCAT
GTCGACTCACGTTTTGGATTCGGCTGAGAAAATGTGTGAACGTTTTGTCATCTTGCATCACGGTCAAGTCTTGGCACAGG
GGACCCTTGAAGAGCTTCGTGAGACATTTGGTGACAGTAGTGCCAGTCTTAACGATATTTACATGCAGTTAACTAAGGGA
GAATTGTCATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6N3BCD8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

97.119

100

0.971
  pptA Streptococcus thermophilus LMD-9

96.708

100

0.967

Multiple sequence alignment