Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   NYE32_RS07680 Genome accession   NZ_CP150201
Coordinates   1705538..1706233 (-) Length   231 a.a.
NCBI ID   WP_073689618.1    Uniprot ID   A0AAW7PL27
Organism   Streptococcus sp. FSL R7-0248     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1700538..1711233
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE32_RS07665 (NYE32_07665) - 1701349..1701894 (-) 546 WP_073689615.1 GNAT family N-acetyltransferase -
  NYE32_RS07670 (NYE32_07670) - 1701960..1703222 (-) 1263 WP_073689616.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  NYE32_RS07675 (NYE32_07675) comEC/celB 1703308..1705548 (-) 2241 WP_073689617.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  NYE32_RS07680 (NYE32_07680) comEA 1705538..1706233 (-) 696 WP_073689618.1 helix-hairpin-helix domain-containing protein Machinery gene
  NYE32_RS07685 (NYE32_07685) - 1706341..1707096 (-) 756 WP_073689619.1 1-acyl-sn-glycerol-3-phosphate acyltransferase -
  NYE32_RS07690 (NYE32_07690) - 1707226..1708161 (+) 936 WP_049545587.1 polysaccharide deacetylase family protein -
  NYE32_RS07695 (NYE32_07695) - 1708211..1708975 (+) 765 WP_049545588.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  NYE32_RS07700 (NYE32_07700) - 1708979..1709248 (+) 270 WP_008535312.1 GIY-YIG nuclease family protein -
  NYE32_RS07705 (NYE32_07705) - 1709455..1711041 (-) 1587 WP_049545589.1 DEAD/DEAH box helicase -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 24562.54 Da        Isoelectric Point: 4.6817

>NTDB_id=966183 NYE32_RS07680 WP_073689618.1 1705538..1706233(-) (comEA) [Streptococcus sp. FSL R7-0248]
MKEKILAYVKDNRLFVSVIAVLMVIFCFFLWMTCGAGNSMEAETSYTDVTTLSTSSSKEGSKSLTEVSSQSKTEESEKDK
SKVTVDVKGAVVKPGVYTLKAGTRVTDAIKAAGGMTEDADAKSVNLAASLSDEEVIYVATKDENLSVLGQSGTSQDSDKG
GQTNAKDGKINLNTATAEELQTISGIGAKRAEDIIAYRESHGGFQSVDDLKNVSGIGDKTLDKIRESLYVA

Nucleotide


Download         Length: 696 bp        

>NTDB_id=966183 NYE32_RS07680 WP_073689618.1 1705538..1706233(-) (comEA) [Streptococcus sp. FSL R7-0248]
GTGAAGGAAAAGATTCTAGCCTATGTCAAAGATAATCGTCTGTTTGTGAGTGTCATCGCTGTACTGATGGTGATTTTTTG
CTTCTTTCTATGGATGACTTGTGGTGCCGGCAACAGCATGGAGGCGGAGACGTCTTATACAGATGTGACAACATTGTCAA
CCTCCTCATCCAAAGAAGGGTCAAAATCACTTACTGAAGTGTCTTCTCAGTCAAAGACGGAAGAAAGTGAAAAGGATAAG
TCAAAAGTAACAGTGGATGTTAAAGGAGCCGTAGTCAAGCCAGGGGTTTATACGCTAAAAGCGGGCACTAGAGTGACTGA
CGCCATCAAAGCCGCTGGGGGAATGACCGAGGATGCGGATGCTAAGAGTGTTAATTTAGCCGCAAGCTTGTCAGACGAAG
AGGTTATCTATGTGGCAACTAAGGATGAAAACCTTTCTGTCCTTGGTCAATCAGGAACTAGTCAGGATTCTGACAAAGGA
GGACAAACTAATGCTAAGGATGGGAAAATTAACTTAAATACAGCGACTGCAGAGGAATTGCAAACCATTTCTGGAATTGG
AGCTAAGCGAGCAGAGGATATCATCGCCTATCGTGAAAGTCATGGAGGCTTTCAATCCGTAGATGACTTGAAAAATGTCT
CAGGAATTGGAGATAAAACATTAGATAAAATCAGAGAGTCCCTCTATGTGGCTTAA

Domains

Predicted by InterproScan.

SLBB domain (SLBB)

(85-138)

Helix-hairpin-helix motif (HHH_3)

(168-228)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Streptococcus thermophilus LMD-9

89.177

100

0.892
  comEA/celA/cilE Streptococcus mitis SK321

40.87

99.567

0.407
  comEA/celA/cilE Streptococcus pneumoniae TIGR4

40

99.567

0.398
  comEA Latilactobacillus sakei subsp. sakei 23K

34.855

100

0.364

Multiple sequence alignment