Detailed information NTG0966059

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: NSQ78_RS17065
• Genome accession: NZ_CP150199
• Coordinates: 3660479..3661852 (+)
• Length: 457 a.a.
• NCBI ID: WP_049471425.1
• Uniprot ID: A0AB34TH98
• Organism: Stenotrophomonas sp. FSL W7-1447
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3655479..3666852

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NSQ78_RS17050 (NSQ78_17050)	sucD	3656334..3657209 (-)	876	WP_005418610.1	succinate--CoA ligase subunit alpha	-
NSQ78_RS17055 (NSQ78_17055)	sucC	3657234..3658403 (-)	1170	WP_005418614.1	ADP-forming succinate--CoA ligase subunit beta	-
NSQ78_RS17060 (NSQ78_17060)	-	3658811..3660424 (+)	1614	WP_049471427.1	ATP-binding protein	-
NSQ78_RS17065 (NSQ78_17065)	pilR	3660479..3661852 (+)	1374	WP_049471425.1	sigma-54 dependent transcriptional regulator	Regulator
NSQ78_RS17070 (NSQ78_17070)	pilB	3661947..3663677 (-)	1731	WP_053506935.1	type IV-A pilus assembly ATPase PilB	Machinery gene
NSQ78_RS17075 (NSQ78_17075)	-	3663838..3664671 (-)	834	WP_064239075.1	sterol desaturase family protein	-
NSQ78_RS17080 (NSQ78_17080)	pilA/pilAI	3664866..3665294 (-)	429	WP_149901976.1	pilin	Machinery gene

Sequence

Protein

• Length: 457 a.a.
• Molecular weight: 49557.84 Da
• Isoelectric Point: 6.2985

>NTDB_id=966059 NSQ78_RS17065 WP_049471425.1 3660479..3661852(+) (pilR) [Stenotrophomonas sp. FSL W7-1447]
MNETRSALVVDDERDIRELLVLTLGRMGLRISTAANLAEARELLASNPYDLCITDMRLPDGNGIELVSEIAHHYPRTPVA
MITAFGSMDLAVEALKAGAFDFVSKPVDIAVLRGLVKHALELNNTERPAPGPAAEQGARLLGDSPAMDVLRTTIGKVARS
QAPVYILGESGVGKELVARTIHAQGARAAGPFVPVNCGAIPGELMESEFFGHRKGSFSGAHADKPGLFQAAHGGTLFLDE
VAELPLQMQVKLLRAIQEKSVRAVGAATEEPVDVRILSATHKDLAELVEDGRFRHDLYYRINVIELRVPPLRERRQDLPE
LAASVLARLARSHGRPTPLLAPSALDALAQYAFPGNVRELENILERALALAEEDCIGADDLRLPQHAPRTPGSAAPAEAV
VDLQPGSAALPSYIEQLERSAIQRALEENRWNKTRTAAQLGITFRALRYKLKKLGME

Nucleotide

• Length: 1374 bp

>NTDB_id=966059 NSQ78_RS17065 WP_049471425.1 3660479..3661852(+) (pilR) [Stenotrophomonas sp. FSL W7-1447]
ATGAACGAAACCCGCAGCGCCCTCGTCGTCGACGACGAACGCGACATCCGCGAACTGCTGGTACTGACGCTCGGCCGCAT
GGGGCTGCGCATCAGTACGGCAGCCAACCTTGCCGAAGCGCGCGAACTGCTGGCCAGCAATCCGTACGACCTGTGCATCA
CCGACATGCGCCTGCCGGACGGCAACGGCATCGAGCTGGTCAGCGAGATCGCCCACCACTACCCGCGCACGCCGGTGGCG
ATGATCACCGCCTTCGGCAGCATGGACCTGGCCGTGGAAGCGCTGAAAGCCGGCGCCTTCGACTTCGTCAGCAAGCCGGT
GGACATCGCCGTGCTGCGCGGCCTGGTCAAGCACGCGCTGGAACTGAACAACACCGAGCGCCCCGCGCCCGGCCCCGCCG
CCGAACAGGGCGCACGCCTGCTCGGCGATTCGCCGGCCATGGACGTGCTGCGTACCACCATCGGCAAGGTCGCGCGCAGC
CAGGCGCCGGTCTACATCCTCGGCGAATCCGGCGTGGGCAAGGAGCTGGTCGCACGCACCATCCACGCCCAGGGCGCCCG
CGCGGCCGGCCCGTTCGTGCCGGTCAACTGCGGCGCCATTCCCGGCGAGCTGATGGAGAGTGAGTTCTTCGGCCACCGCA
AGGGCAGCTTCAGCGGCGCCCACGCCGACAAGCCCGGGCTGTTCCAGGCCGCGCACGGCGGCACCCTGTTCCTCGACGAA
GTTGCCGAGCTGCCCCTGCAGATGCAGGTGAAGCTGCTGCGCGCGATCCAGGAGAAGTCGGTGCGCGCGGTGGGCGCTGC
CACCGAAGAACCGGTGGACGTGCGCATCCTCTCGGCCACCCACAAGGACCTGGCCGAACTGGTCGAGGACGGGCGCTTCC
GCCACGACCTCTACTACCGCATCAACGTGATCGAACTGAGGGTGCCGCCGCTGCGCGAGCGTCGCCAGGACCTGCCGGAA
CTGGCCGCATCGGTGCTAGCTCGGCTGGCCCGCAGCCATGGCCGCCCGACGCCGCTGCTGGCGCCGTCGGCGTTGGACGC
GCTGGCCCAGTACGCCTTCCCCGGCAACGTGCGCGAACTGGAGAACATCCTGGAACGCGCGCTGGCACTGGCCGAGGAAG
ATTGCATCGGCGCCGACGACCTGCGCCTGCCGCAGCATGCCCCGCGCACGCCCGGCAGCGCAGCGCCCGCCGAAGCCGTG
GTGGACCTGCAACCCGGCAGCGCCGCCCTGCCCTCGTACATCGAACAACTCGAGCGCAGCGCCATCCAGCGCGCGCTGGA
AGAAAACCGCTGGAACAAGACCCGCACCGCCGCGCAGCTGGGCATCACCTTCCGCGCGCTGCGCTACAAGCTGAAGAAGC
TGGGGATGGAGTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (8-115)

• Sigma-54 interaction domain (Sigma54_activat) (141-306)

• Bacterial regulatory protein, Fis family (HTH_8) (414-454)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	62.719	99.781	0.626
pilR	Acinetobacter baumannii strain A118	47.948	100	0.486