Detailed information    

insolico Bioinformatically predicted

Overview


Name   letA   Type   Regulator
Locus tag   ACJ228_RS10860 Genome accession   NZ_CP175642
Coordinates   2269924..2270559 (-) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain G7     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2264924..2275559
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJ228_RS10845 (ACJ228_10845) - 2265711..2266895 (+) 1185 WP_000939109.1 S41 family peptidase -
  ACJ228_RS10850 (ACJ228_10850) - 2266899..2268320 (-) 1422 WP_000840548.1 sigma-54 dependent transcriptional regulator -
  ACJ228_RS10855 (ACJ228_10855) pilS 2268345..2269913 (-) 1569 WP_001160337.1 PAS domain-containing sensor histidine kinase Regulator
  ACJ228_RS10860 (ACJ228_10860) letA 2269924..2270559 (-) 636 WP_000633799.1 response regulator Regulator
  ACJ228_RS10865 (ACJ228_10865) pbpG 2270772..2271818 (+) 1047 WP_001984577.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  ACJ228_RS10870 (ACJ228_10870) thrC 2271927..2273066 (-) 1140 WP_000063593.1 threonine synthase -
  ACJ228_RS10875 (ACJ228_10875) - 2273122..2274423 (-) 1302 WP_000805827.1 homoserine dehydrogenase -
  ACJ228_RS10880 (ACJ228_10880) - 2274668..2275483 (-) 816 WP_000011168.1 DsbC family protein -

Sequence


Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=965694 ACJ228_RS10860 WP_000633799.1 2269924..2270559(-) (letA) [Acinetobacter baumannii strain G7]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=965694 ACJ228_RS10860 WP_000633799.1 2269924..2270559(-) (letA) [Acinetobacter baumannii strain G7]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAACATGCCGGGCATCGGTGGCGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTTGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCATTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGTGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGCGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAGCCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55

  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55


Multiple sequence alignment