Detailed information NTG0964894

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: ACICHK_RS14805
• Genome accession: NZ_CP174283
• Coordinates: 3282777..3284063 (-)
• Length: 428 a.a.
• NCBI ID: WP_151471405.1
• Uniprot ID: A0A7J5DDX9
• Organism: Streptomyces sp. AHU1
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3277777..3289063

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACICHK_RS14795 (ACICHK_14795)	-	3278509..3281133 (-)	2625	WP_406837263.1	valine--tRNA ligase	-
ACICHK_RS14800 (ACICHK_14800)	-	3281271..3282206 (+)	936	WP_406837264.1	hypothetical protein	-
ACICHK_RS14805 (ACICHK_14805)	clpX	3282777..3284063 (-)	1287	WP_151471405.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
ACICHK_RS14810 (ACICHK_14810)	clpP	3284223..3284903 (-)	681	WP_037618822.1	ATP-dependent Clp protease proteolytic subunit	Regulator
ACICHK_RS14815 (ACICHK_14815)	clpP	3285021..3285629 (-)	609	WP_192582552.1	ATP-dependent Clp protease proteolytic subunit	Regulator
ACICHK_RS14820 (ACICHK_14820)	tig	3286099..3287484 (-)	1386	WP_406837265.1	trigger factor	-
ACICHK_RS14835 (ACICHK_14835)	-	3288258..3288452 (-)	195	WP_103551386.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46967.83 Da
• Isoelectric Point: 4.8317

>NTDB_id=964894 ACICHK_RS14805 WP_151471405.1 3282777..3284063(-) (clpX) [Streptomyces sp. AHU1]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGENSTGQNREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKLIESRAGAKGIGFGATIRSKRELESKDQFEAVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQAVMYEVPSRKDVARVVIT
ADVVLRNVNPTLIPRDARRGGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=964894 ACICHK_RS14805 WP_151471405.1 3282777..3284063(-) (clpX) [Streptomyces sp. AHU1]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCCGAGACGA
GCGAGGTGCGCTGGGAGGAACTTCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGGTACGTGGTCGGCCAGGAGTCG
GCCAAGAAGGCCCTCTCCGTCGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGTGAGAACAGCACGGGCCAGAACCG
CGAGGACGCCATCGAGCTCGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTCCTGGCCCAGA
CCCTCGCGCGCATGCTGAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCGGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGTAAGAGCGAAAACCCGTCGATCACGCGCGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTCAAGATCCTCGAGGGCACGACGGCCTCGGTGCCGCCGCAGGGCGGACGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGTGCCTTCGCGGGCCTGGAGAAGCTCATCGAGTCCAGGGCCGGCGC
GAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCGCGAGCTGGAGTCCAAGGACCAGTTCGAGGCCGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGTCTGCCGGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCGCTCCTGCAGATCCTGGTCGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTGCGCCAGACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGGCCGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTCGTCATCACC
GCCGACGTGGTCCTGCGCAACGTCAACCCGACCCTGATCCCGAGGGACGCCCGCCGCGGCGGCCCCGGGGAGCAGAAGAC
GGCGTAG

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

3D structure

• AlphaFold DB: A0A7J5DDX9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.438	93.925	0.586
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521