Detailed information
Bioinformatically predicted
Overview
| Name | comW | Type | Regulator |
| Locus tag | AAA995_RS00215 | Genome accession | NZ_AP028877 |
| Coordinates | 35329..35565 (+) | Length | 78 a.a. |
| NCBI ID | WP_000939545.1 | Uniprot ID | A0A0H2ZMA7 |
| Organism | Streptococcus pneumoniae strain 21P20 | ||
| Function | stabilization and activation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 30329..40565
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAA995_RS00205 | - | 33958..34167 (+) | 210 | Protein_34 | transposase | - |
| AAA995_RS00210 | - | 34202..35063 (-) | 862 | Protein_35 | transposase | - |
| AAA995_RS00215 (SP21P20_00400) | comW | 35329..35565 (+) | 237 | WP_000939545.1 | sigma(X)-activator ComW | Regulator |
| AAA995_RS00220 (SP21P20_00410) | - | 35796..37082 (+) | 1287 | WP_000205044.1 | adenylosuccinate synthase | - |
| AAA995_RS00225 (SP21P20_00420) | tadA | 37283..37750 (+) | 468 | WP_000291870.1 | tRNA adenosine(34) deaminase TadA | - |
| AAA995_RS00235 (SP21P20_00430) | - | 37937..38380 (+) | 444 | WP_000701992.1 | dUTP diphosphatase | - |
| AAA995_RS00240 (SP21P20_00440) | - | 38382..38897 (+) | 516 | WP_000691236.1 | histidine phosphatase family protein | - |
| AAA995_RS00245 (SP21P20_00450) | radA | 38911..40272 (+) | 1362 | WP_078139281.1 | DNA repair protein RadA | Machinery gene |
Sequence
Protein
Download Length: 78 a.a. Molecular weight: 9658.13 Da Isoelectric Point: 6.7051
>NTDB_id=96441 AAA995_RS00215 WP_000939545.1 35329..35565(+) (comW) [Streptococcus pneumoniae strain 21P20]
MLQKIYEQMANFYDSIEEEYGPTFGDNFDWEHVHFKFLIYYLVRYGIGCRKDFIVYHYRVAYRLYLEKLVMNRGFISC
MLQKIYEQMANFYDSIEEEYGPTFGDNFDWEHVHFKFLIYYLVRYGIGCRKDFIVYHYRVAYRLYLEKLVMNRGFISC
Nucleotide
Download Length: 237 bp
>NTDB_id=96441 AAA995_RS00215 WP_000939545.1 35329..35565(+) (comW) [Streptococcus pneumoniae strain 21P20]
ATGTTACAAAAAATTTATGAGCAGATGGCTAATTTCTATGATAGTATTGAAGAAGAGTATGGTCCTACATTTGGTGATAA
TTTTGACTGGGAACATGTTCATTTTAAATTTTTAATTTATTATTTAGTGAGATATGGCATTGGTTGTCGTAAGGATTTTA
TTGTTTACCATTATCGTGTTGCTTATCGTTTGTATCTTGAAAAATTGGTAATGAATCGGGGTTTTATTTCTTGTTGA
ATGTTACAAAAAATTTATGAGCAGATGGCTAATTTCTATGATAGTATTGAAGAAGAGTATGGTCCTACATTTGGTGATAA
TTTTGACTGGGAACATGTTCATTTTAAATTTTTAATTTATTATTTAGTGAGATATGGCATTGGTTGTCGTAAGGATTTTA
TTGTTTACCATTATCGTGTTGCTTATCGTTTGTATCTTGAAAAATTGGTAATGAATCGGGGTTTTATTTCTTGTTGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comW | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| comW | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| comW | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| comW | Streptococcus pneumoniae TIGR4 |
100 |
100 |
1 |
| comW | Streptococcus mitis SK321 |
75.641 |
100 |
0.756 |
| comW | Streptococcus mitis NCTC 12261 |
75.325 |
98.718 |
0.744 |