Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   NSQ21_RS06120 Genome accession   NZ_CP150158
Coordinates   1188887..1189840 (+) Length   317 a.a.
NCBI ID   WP_014476425.1    Uniprot ID   A0A0K6M9I2
Organism   Bacillus sp. PS210     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1183887..1194840
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ21_RS06095 (NSQ21_06095) argF 1185720..1186679 (+) 960 WP_032721338.1 ornithine carbamoyltransferase -
  NSQ21_RS06100 (NSQ21_06100) - 1186765..1186944 (+) 180 WP_003245356.1 YjzC family protein -
  NSQ21_RS06105 (NSQ21_06105) - 1186990..1187175 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  NSQ21_RS06110 (NSQ21_06110) - 1187424..1188158 (+) 735 WP_213376817.1 hypothetical protein -
  NSQ21_RS06115 (NSQ21_06115) - 1188240..1188797 (+) 558 WP_089172508.1 hypothetical protein -
  NSQ21_RS06120 (NSQ21_06120) med 1188887..1189840 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  NSQ21_RS06125 (NSQ21_06125) comZ 1189855..1190046 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  NSQ21_RS06130 (NSQ21_06130) yjzB 1190076..1190315 (-) 240 WP_003232972.1 spore coat protein YjzB -
  NSQ21_RS06135 (NSQ21_06135) fabH 1190480..1191418 (+) 939 WP_213376815.1 beta-ketoacyl-ACP synthase III -
  NSQ21_RS06140 (NSQ21_06140) fabF 1191441..1192682 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  NSQ21_RS06145 (NSQ21_06145) - 1192758..1193543 (+) 786 WP_003232967.1 DUF2268 domain-containing protein -
  NSQ21_RS06150 (NSQ21_06150) appD 1193735..1194721 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35310.84 Da        Isoelectric Point: 4.6031

>NTDB_id=963891 NSQ21_RS06120 WP_014476425.1 1188887..1189840(+) (med) [Bacillus sp. PS210]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=963891 NSQ21_RS06120 WP_014476425.1 1188887..1189840(+) (med) [Bacillus sp. PS210]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGTACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGTTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAATAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0K6M9I2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

99.685

100

0.997