Detailed information NTG0960182

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: WKI52_RS02365
• Genome accession: NZ_CP149646
• Coordinates: 458319..459482 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain MJ06
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 453319..464482

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WKI52_RS02335 (WKI52_02335)	-	453584..454003 (-)	420	WP_014419009.1	TIGR03826 family flagellar region protein	-
WKI52_RS02340 (WKI52_02340)	comFC	454077..454766 (-)	690	WP_199803302.1	phosphoribosyltransferase family protein	Machinery gene
WKI52_RS02345 (WKI52_02345)	-	454772..455056 (-)	285	WP_022553866.1	competence protein ComFB	-
WKI52_RS02350 (WKI52_02350)	comFA	455114..456499 (-)	1386	WP_063636495.1	DEAD/DEAH box helicase	Machinery gene
WKI52_RS02355 (WKI52_02355)	-	456607..457455 (-)	849	WP_003151387.1	DegV family protein	-
WKI52_RS02360 (WKI52_02360)	degU	457553..458242 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
WKI52_RS02365 (WKI52_02365)	degS	458319..459482 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
WKI52_RS02370 (WKI52_02370)	-	459705..460352 (+)	648	WP_060657503.1	YigZ family protein	-
WKI52_RS02375 (WKI52_02375)	-	460357..461550 (+)	1194	WP_128974134.1	LCP family protein	-
WKI52_RS02380 (WKI52_02380)	-	461650..462726 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
WKI52_RS02385 (WKI52_02385)	-	462858..464054 (-)	1197	WP_017418813.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=960182 WKI52_RS02365 WP_003151385.1 458319..459482(-) (degS) [Bacillus velezensis strain MJ06]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=960182 WKI52_RS02365 WP_003151385.1 458319..459482(-) (degS) [Bacillus velezensis strain MJ06]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTCCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948