Detailed information
Bioinformatically predicted
Overview
| Name | comA | Type | Regulator |
| Locus tag | AABA19_RS06335 | Genome accession | NZ_AP028609 |
| Coordinates | 1258515..1258679 (-) | Length | 54 a.a. |
| NCBI ID | WP_109701449.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain Sep4 | ||
| Function | processing and transport of ComC (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1253515..1263679
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AABA19_RS06305 (TKY121806_12420) | - | 1254484..1254726 (+) | 243 | WP_000710764.1 | type B 50S ribosomal protein L31 | - |
| AABA19_RS06310 (TKY121806_12430) | - | 1254783..1255001 (-) | 219 | WP_000028150.1 | hypothetical protein | - |
| AABA19_RS06315 | - | 1254998..1255749 (-) | 752 | Protein_1249 | transposase | - |
| AABA19_RS06320 (TKY121806_12450) | gdhA | 1256086..1257432 (+) | 1347 | WP_000199564.1 | NADP-specific glutamate dehydrogenase | - |
| AABA19_RS06325 (TKY121806_12460) | - | 1257928..1258098 (-) | 171 | WP_000711942.1 | hypothetical protein | - |
| AABA19_RS06330 (TKY121806_12470) | comA/nlmT | 1258111..1258458 (-) | 348 | WP_078133805.1 | ATP-binding cassette domain-containing protein | Regulator |
| AABA19_RS06335 | comA | 1258515..1258679 (-) | 165 | WP_109701449.1 | hypothetical protein | Regulator |
| AABA19_RS06340 (TKY121806_12480) | - | 1258705..1259194 (-) | 490 | Protein_1254 | transposase | - |
| AABA19_RS06345 (TKY121806_12490) | - | 1259203..1259917 (+) | 715 | Protein_1255 | IS630 family transposase | - |
| AABA19_RS06350 (TKY121806_12500) | - | 1260151..1260603 (-) | 453 | Protein_1256 | hypothetical protein | - |
| AABA19_RS06355 (TKY121806_12520) | - | 1260605..1260892 (-) | 288 | WP_000869754.1 | hypothetical protein | - |
| AABA19_RS06360 | - | 1261477..1262828 (+) | 1352 | WP_088804224.1 | IS3-like element ISSpn4 family transposase | - |
| AABA19_RS06365 | - | 1262928..1263326 (-) | 399 | Protein_1259 | ATP-binding cassette domain-containing protein | - |
Sequence
Protein
Download Length: 54 a.a. Molecular weight: 6025.02 Da Isoelectric Point: 8.6616
>NTDB_id=95968 AABA19_RS06335 WP_109701449.1 1258515..1258679(-) (comA) [Streptococcus pneumoniae strain Sep4]
MPSGLYKIDTGKVLFDGVNINQIDKKILSQNLGVVPQDSFLLNRSILDNITLKH
MPSGLYKIDTGKVLFDGVNINQIDKKILSQNLGVVPQDSFLLNRSILDNITLKH
Nucleotide
Download Length: 165 bp
>NTDB_id=95968 AABA19_RS06335 WP_109701449.1 1258515..1258679(-) (comA) [Streptococcus pneumoniae strain Sep4]
ATACCATCAGGATTATATAAGATTGATACAGGAAAAGTTTTATTTGATGGTGTAAATATTAATCAAATAGATAAAAAAAT
ATTAAGTCAAAATTTAGGAGTAGTTCCACAGGATTCATTTTTATTGAACCGAAGTATTCTTGATAACATAACTTTAAAGC
ACTAG
ATACCATCAGGATTATATAAGATTGATACAGGAAAAGTTTTATTTGATGGTGTAAATATTAATCAAATAGATAAAAAAAT
ATTAAGTCAAAATTTAGGAGTAGTTCCACAGGATTCATTTTTATTGAACCGAAGTATTCTTGATAACATAACTTTAAAGC
ACTAG
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comA | Streptococcus mitis NCTC 12261 |
42.308 |
96.296 |
0.407 |
| comA | Streptococcus pneumoniae Rx1 |
40.385 |
96.296 |
0.389 |
| comA | Streptococcus pneumoniae D39 |
40.385 |
96.296 |
0.389 |
| comA | Streptococcus pneumoniae R6 |
40.385 |
96.296 |
0.389 |
| comA | Streptococcus mitis SK321 |
40.385 |
96.296 |
0.389 |