Detailed information
Bioinformatically predicted
Overview
| Name | comW | Type | Regulator |
| Locus tag | AABA19_RS00115 | Genome accession | NZ_AP028609 |
| Coordinates | 22167..22403 (+) | Length | 78 a.a. |
| NCBI ID | WP_000939545.1 | Uniprot ID | A0A0H2ZMA7 |
| Organism | Streptococcus pneumoniae strain Sep4 | ||
| Function | stabilization and activation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 17167..27403
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AABA19_RS00105 | - | 20224..21070 (+) | 847 | Protein_14 | IS630 family transposase | - |
| AABA19_RS00110 | - | 21105..21901 (-) | 797 | Protein_15 | transposase | - |
| AABA19_RS00115 (TKY121806_00170) | comW | 22167..22403 (+) | 237 | WP_000939545.1 | sigma(X)-activator ComW | Regulator |
| AABA19_RS00120 (TKY121806_00180) | - | 22634..23920 (+) | 1287 | WP_000205044.1 | adenylosuccinate synthase | - |
| AABA19_RS00125 (TKY121806_00190) | tadA | 24121..24588 (+) | 468 | WP_000291874.1 | tRNA adenosine(34) deaminase TadA | - |
| AABA19_RS00135 (TKY121806_00200) | - | 24775..25218 (+) | 444 | WP_000701992.1 | dUTP diphosphatase | - |
| AABA19_RS00140 (TKY121806_00210) | - | 25220..25735 (+) | 516 | WP_000691236.1 | histidine phosphatase family protein | - |
| AABA19_RS00145 (TKY121806_00220) | radA | 25749..27110 (+) | 1362 | WP_074017595.1 | DNA repair protein RadA | Machinery gene |
Sequence
Protein
Download Length: 78 a.a. Molecular weight: 9658.13 Da Isoelectric Point: 6.7051
>NTDB_id=95910 AABA19_RS00115 WP_000939545.1 22167..22403(+) (comW) [Streptococcus pneumoniae strain Sep4]
MLQKIYEQMANFYDSIEEEYGPTFGDNFDWEHVHFKFLIYYLVRYGIGCRKDFIVYHYRVAYRLYLEKLVMNRGFISC
MLQKIYEQMANFYDSIEEEYGPTFGDNFDWEHVHFKFLIYYLVRYGIGCRKDFIVYHYRVAYRLYLEKLVMNRGFISC
Nucleotide
Download Length: 237 bp
>NTDB_id=95910 AABA19_RS00115 WP_000939545.1 22167..22403(+) (comW) [Streptococcus pneumoniae strain Sep4]
ATGTTACAAAAAATTTATGAGCAGATGGCTAATTTCTATGATAGTATTGAAGAAGAGTATGGTCCTACATTTGGTGATAA
TTTTGACTGGGAACATGTTCATTTTAAATTTTTAATTTATTATTTAGTGAGATATGGCATTGGTTGTCGTAAGGATTTTA
TTGTTTACCATTATCGTGTTGCTTATCGTTTGTATCTTGAAAAATTGGTAATGAATCGGGGGTTTATTTCTTGTTGA
ATGTTACAAAAAATTTATGAGCAGATGGCTAATTTCTATGATAGTATTGAAGAAGAGTATGGTCCTACATTTGGTGATAA
TTTTGACTGGGAACATGTTCATTTTAAATTTTTAATTTATTATTTAGTGAGATATGGCATTGGTTGTCGTAAGGATTTTA
TTGTTTACCATTATCGTGTTGCTTATCGTTTGTATCTTGAAAAATTGGTAATGAATCGGGGGTTTATTTCTTGTTGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comW | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| comW | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| comW | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| comW | Streptococcus pneumoniae TIGR4 |
100 |
100 |
1 |
| comW | Streptococcus mitis SK321 |
75.641 |
100 |
0.756 |
| comW | Streptococcus mitis NCTC 12261 |
75.325 |
98.718 |
0.744 |