Detailed information NTG0953899

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: ACGH52_RS13545
• Genome accession: NZ_CP172447
• Coordinates: 2992818..2994104 (-)
• Length: 428 a.a.
• NCBI ID: WP_076974314.1
• Uniprot ID: -
• Organism: Streptomyces sp. BBFR25
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2987818..2999104

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACGH52_RS13535 (ACGH52_13535)	-	2988991..2991615 (-)	2625	WP_076974312.1	valine--tRNA ligase	-
ACGH52_RS13540 (ACGH52_13540)	-	2991754..2992740 (+)	987	WP_076974313.1	hypothetical protein	-
ACGH52_RS13545 (ACGH52_13545)	clpX	2992818..2994104 (-)	1287	WP_076974314.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
ACGH52_RS13550 (ACGH52_13550)	clpP	2994296..2995006 (-)	711	WP_076974315.1	ATP-dependent Clp protease proteolytic subunit	Regulator
ACGH52_RS13555 (ACGH52_13555)	clpP	2995057..2995662 (-)	606	WP_059302418.1	ATP-dependent Clp protease proteolytic subunit	Regulator
ACGH52_RS13560 (ACGH52_13560)	tig	2995984..2997390 (-)	1407	WP_399939343.1	trigger factor	-
ACGH52_RS13575 (ACGH52_13575)	-	2998001..2998195 (-)	195	WP_059302352.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46825.63 Da
• Isoelectric Point: 4.7389

>NTDB_id=953899 ACGH52_RS13545 WP_076974314.1 2992818..2994104(-) (clpX) [Streptomyces sp. BBFR25]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLESYVVGQEA
AKKALSVAVYNHYKRVQAGENGGAQGREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIEGRAGAKGIGFGATIRSKREIESKDQFEQVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYERLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDSRGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=953899 ACGH52_RS13545 WP_076974314.1 2992818..2994104(-) (clpX) [Streptomyces sp. BBFR25]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGGAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAGCTGGCCGAGACCA
GTGAGGTGCGCTGGGAGGAGCTTCCGAAGCCCCGCGAGATCTACGAGTTCCTCGAGAGCTACGTGGTCGGCCAGGAAGCG
GCCAAGAAAGCCCTCTCCGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGCGAGAACGGCGGCGCCCAAGGCCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACCCTCCTCGCTCAGA
CCCTCGCCCGCATGCTGAACGTGCCCTTCGCGATCGCCGACGCCACGGCGCTCACCGAGGCGGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCCGCTGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCGCGGAAGAGCGAAAACCCCTCCATCACCCGCGACGTGTCGGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACGGCCTCCGTCCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCGCGGGCCTGGAGAAGATCATCGAGGGCCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGGGAGATCGAGTCCAAGGACCAGTTCGAGCAGGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGGCTCCCGGTCATCACCTCGGTGCACAACCTGGACCGC
GAGGCGCTCCTCCAGATCCTGGTCGAGCCGCGCAACGCCCTCGTCAAGCAGTACGAGCGCCTCTTCGAACTCGACGGCGT
CGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGAGCCCGCGGCCTGC
GCGCCATCATGGAGGAGGTCCTCCAGGGCGTGATGTACGAGGTCCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACC
GCCGACGTGGTCCTCTCCAACGTCAACCCGACGCTCATCCCCCGTGATTCGCGGGGCCGGGGCCCGGGCGAGCAGAAGAC
GGCGTAG

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.027	94.159	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521