Detailed information NTG0953602

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: ACGH2B_RS19250
• Genome accession: NZ_CP172415
• Coordinates: 4742129..4743412 (+)
• Length: 427 a.a.
• NCBI ID: WP_399091018.1
• Uniprot ID: -
• Organism: Streptomyces sp. BBFR2
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 4737129..4748412

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACGH2B_RS19215 (ACGH2B_19215)	-	4737610..4737804 (+)	195	WP_030283919.1	hypothetical protein	-
ACGH2B_RS19220 (ACGH2B_19220)	-	4737898..4738284 (-)	387	WP_399091009.1	arsenate reductase family protein	-
ACGH2B_RS19235 (ACGH2B_19235)	tig	4738946..4740337 (+)	1392	WP_399091012.1	trigger factor	-
ACGH2B_RS19240 (ACGH2B_19240)	clpP	4740623..4741225 (+)	603	WP_399097122.1	ATP-dependent Clp protease proteolytic subunit	Regulator
ACGH2B_RS19245 (ACGH2B_19245)	clpP	4741293..4741970 (+)	678	WP_399091015.1	ATP-dependent Clp protease proteolytic subunit	Regulator
ACGH2B_RS19250 (ACGH2B_19250)	clpX	4742129..4743412 (+)	1284	WP_399091018.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
ACGH2B_RS19255 (ACGH2B_19255)	-	4743488..4744435 (-)	948	WP_399091021.1	hypothetical protein	-
ACGH2B_RS19260 (ACGH2B_19260)	-	4744573..4747191 (+)	2619	WP_399091024.1	valine--tRNA ligase	-
ACGH2B_RS19265 (ACGH2B_19265)	-	4747157..4748398 (-)	1242	WP_399091027.1	hypothetical protein	-

Sequence

Protein

• Length: 427 a.a.
• Molecular weight: 46583.34 Da
• Isoelectric Point: 4.9413

>NTDB_id=953602 ACGH2B_RS19250 WP_399091018.1 4742129..4743412(+) (clpX) [Streptomyces sp. BBFR2]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLGGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGRGDDGIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAFADATALTEAGYVGEDV
ENILLKLIQAADFDIKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQI
DTTNVLFIVGGAFAGLDKIIEARSGAKGIGFGATIRSKREIESKDQLKDVMPEDLVKFGLIPEFIGRLPVLTSVHNLDRE
TLLQILVEPRNALVKQYKRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVITE
DVVHSNVNPTLVPRSRGESGEPHEKSA

Nucleotide

• Length: 1284 bp

>NTDB_id=953602 ACGH2B_RS19250 WP_399091018.1 4742129..4743412(+) (clpX) [Streptomyces sp. BBFR2]
GTGGCACGCATCGGTGACGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGTCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCTGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAAATCATCGAGGAGGAGCTGGCCGAGACCT
CCGAGGTGCGCTGGGAGGAGCTTCCCAAGCCCCGCGAGATCTACGAGTTCCTGGGCGGCTACGTCGTCGGTCAGGAGCCC
GCCAAGAAGGCCCTCTCGGTCGCCGTCTACAACCACTACAAGCGGGTGCAGGCGGGCGAGAACGGCGGCGGTCGCGGTGA
CGACGGCATCGAGCTGGCGAAGTCCAACATCCTGCTGCTCGGCCCCACCGGTTCCGGAAAAACGCTGCTCGCGCAGACCC
TCGCCCGGATGCTGAACGTCCCGTTCGCCTTCGCGGACGCCACCGCCCTCACCGAGGCCGGGTACGTCGGCGAGGACGTC
GAGAACATCCTGCTCAAGCTGATCCAGGCCGCGGACTTCGACATCAAGAAGGCCGAGACGGGGATCATCTACATCGACGA
GATCGACAAGGTCGCCCGGAAGAGCGAGAACCCGTCGATCACCCGTGACGTCTCCGGCGAGGGCGTCCAGCAGGCGCTGC
TGAAGATCCTGGAGGGCACCACCGCCTCGGTGCCGCCGCAGGGCGGGCGCAAGCACCCGCACCAGGAGTTCATCCAGATC
GACACGACGAACGTGCTGTTCATCGTGGGCGGCGCGTTCGCCGGTCTGGACAAGATCATCGAGGCGCGGTCCGGCGCCAA
GGGCATCGGCTTCGGCGCCACGATCCGCTCCAAGCGCGAGATCGAGTCGAAGGACCAGCTCAAGGACGTCATGCCGGAGG
ACCTGGTGAAGTTCGGGCTGATCCCCGAGTTCATCGGCCGGCTGCCCGTCCTCACCTCGGTGCACAACCTCGACCGCGAG
ACGCTGCTGCAGATCCTCGTCGAGCCGCGCAACGCCCTCGTCAAGCAGTACAAGCGCCTCTTCGAACTCGACGGCGTGGA
GCTGGACTTCGACCGCCCGGCGCTGGAGGCCATCGCCGACCAGGCGATCTTGCGCGGCACCGGCGCCCGCGGACTGCGCG
CGATCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTCCCCTCCCGCAAGGACGTGGCCCGCGTCGTCATCACCGAG
GACGTCGTGCACTCCAACGTCAACCCGACCCTGGTGCCGCGCAGCCGCGGCGAGTCGGGCGAGCCGCACGAGAAGAGCGC
GTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (317-394)

• AAA domain (Cdc48 subfamily) (AAA_2) (114-310)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.095	93.911	0.583
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.415	96.019	0.513