Detailed information NTG0948999

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: WDW95_RS07355
• Genome accession: NZ_CP147857
• Coordinates: 1480741..1482993 (-)
• Length: 750 a.a.
• NCBI ID: WP_368651380.1
• Uniprot ID: -
• Organism: Lactococcus raffinolactis strain APC3967
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1475741..1487993

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WDW95_RS07325	atpA	1475998..1477503 (-)	1506	WP_061773979.1	F0F1 ATP synthase subunit alpha	-
WDW95_RS07330	-	1477644..1478171 (-)	528	WP_061773978.1	F0F1 ATP synthase subunit delta	-
WDW95_RS07335	atpF	1478174..1478683 (-)	510	WP_061773977.1	F0F1 ATP synthase subunit B	-
WDW95_RS07340	atpB	1478696..1479406 (-)	711	WP_096039368.1	F0F1 ATP synthase subunit A	-
WDW95_RS07345	-	1479512..1479712 (-)	201	WP_003140734.1	F0F1 ATP synthase subunit C	-
WDW95_RS07350	-	1479868..1480662 (-)	795	WP_368651379.1	alpha/beta hydrolase	-
WDW95_RS07355	comEC	1480741..1482993 (-)	2253	WP_368651380.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
WDW95_RS07360	-	1482959..1483612 (-)	654	WP_368651381.1	helix-hairpin-helix domain-containing protein	-
WDW95_RS07365	-	1483670..1484890 (-)	1221	WP_157738471.1	ABC transporter permease	-
WDW95_RS07370	-	1484883..1485776 (-)	894	WP_061773972.1	ABC transporter ATP-binding protein	-
WDW95_RS07375	-	1485951..1486385 (-)	435	WP_061773971.1	hypothetical protein	-
WDW95_RS07380	-	1486441..1486635 (-)	195	WP_061773970.1	helix-turn-helix transcriptional regulator	-

Sequence

Protein

• Length: 750 a.a.
• Molecular weight: 85573.59 Da
• Isoelectric Point: 10.1271

>NTDB_id=948999 WDW95_RS07355 WP_368651380.1 1480741..1482993(-) (comEC) [Lactococcus raffinolactis strain APC3967]
MKNLKKALRWINLPSIFIAYFCVLIYYTVFCFSYLLLGYLIISLLILIWQNGIRTCLKLSMILIGFATICLALQDREAKD
FAREMTVTRISPILDTIQVDGDQVSFRGKSGKQTYQVYYRVTTEQEQRYFKQLAQPVVLSISGQLEKASQQRNFNGFDYQ
HHLKTQNIYRVLTIEQVTGVTRKQTLTLALLRRKAILFSEQHFPRPMSAYMTGLLFGHLGKDFEDMSSIYTSLGIMHLFA
LSGMQVSFFIDFLRKGMLRLGFRRDVVDWFQIPFSVFYAGLTGFSISVNRSLVQKILANFGIKALDNFSLTLLLLFITAP
KFLLTTGGTLSLLFAFVISIFGDRFENLPKYRKLLAESLTLSLCVLSLLILYFHTFQPVSIILTFVFSFLFDILFLPGLS
VIFLLAMVTGFTLTQVNLIFQWLEDLIKLTDSWWHYPLVLGKPTALVFLVTLVVTGFLIDHWRNRKVSARLAIILMGLFF
ITKNPPTPSITMVDVGQGDSIFLQDKFNRRNILIDTGGRIELGKKKKWQERNIAAPAEKTLIPYLKSRGVGQIDTLVLTH
THEDHMGDLLAVIDQIKVKNIIVSQGSLNNAQFVKLLKQTRAKVQVAKVGQRLKIFDSYLEVLYPLTPGDGKNNDSIVLY
GKLYGTKFLLTGDLEETGERELLTRYPNLSVDVLKVGHHGSKTSSSESFIEAIRPKVGLISCGLDNRYGHPNMETLTTFQ
KYEVQTFRTDYHGAIKFKKNSKFWHISTVK

Nucleotide

• Length: 2253 bp

>NTDB_id=948999 WDW95_RS07355 WP_368651380.1 1480741..1482993(-) (comEC) [Lactococcus raffinolactis strain APC3967]
TTGAAAAACTTAAAGAAAGCATTACGGTGGATTAATCTACCATCGATTTTCATCGCCTATTTTTGTGTGCTGATCTACTA
TACCGTCTTTTGTTTCTCCTATTTACTTTTAGGTTATCTCATCATTTCTTTGCTAATCTTGATCTGGCAAAATGGCATCA
GAACTTGTTTAAAGCTCAGCATGATCTTAATTGGGTTTGCAACCATTTGTCTAGCGCTACAAGATCGTGAAGCTAAAGAT
TTTGCGCGTGAGATGACAGTGACACGGATCAGCCCCATACTGGATACGATTCAGGTGGATGGTGACCAGGTCTCTTTTCG
TGGGAAATCGGGCAAACAAACCTATCAAGTCTATTATAGGGTCACGACGGAACAAGAGCAGCGCTACTTTAAGCAATTAG
CACAACCAGTCGTCCTATCCATTTCAGGTCAACTAGAAAAAGCGAGTCAACAAAGAAATTTCAATGGCTTTGATTATCAA
CACCATCTCAAGACACAAAATATCTATCGAGTTTTGACGATTGAACAGGTGACAGGGGTGACAAGAAAACAAACCTTAAC
CTTAGCGCTCTTACGACGAAAAGCTATTTTGTTTAGTGAGCAACACTTTCCGCGACCTATGTCAGCCTACATGACCGGTT
TACTTTTTGGGCATCTCGGTAAAGATTTTGAAGATATGAGCAGTATCTATACCAGCTTAGGCATCATGCACCTCTTTGCG
CTATCAGGCATGCAAGTGTCATTTTTTATCGACTTTTTAAGAAAGGGTATGCTCAGACTAGGGTTCAGGAGAGATGTTGT
CGATTGGTTTCAAATCCCTTTTTCTGTTTTTTATGCTGGTCTTACAGGATTTTCCATATCTGTCAACAGATCCTTGGTCC
AGAAAATCCTAGCTAATTTTGGAATTAAGGCGCTTGACAATTTCAGTCTCACGTTGTTGCTTCTATTTATCACGGCGCCA
AAATTCCTTTTAACCACAGGCGGCACCTTGTCTTTACTTTTTGCCTTCGTCATTTCAATCTTTGGTGATCGCTTTGAGAA
CCTCCCAAAATATCGTAAACTACTAGCAGAAAGTTTAACCCTTTCTCTATGCGTTTTATCGCTCCTCATCCTTTATTTTC
ACACCTTCCAACCAGTGTCGATCATCTTGACCTTTGTCTTCAGCTTTCTTTTTGATATTCTCTTCCTACCAGGTCTATCC
GTCATTTTCTTGCTAGCAATGGTAACAGGCTTCACGCTAACACAAGTCAATCTCATTTTTCAGTGGCTTGAAGACCTTAT
CAAATTGACAGATAGCTGGTGGCATTATCCGTTAGTACTTGGTAAACCAACAGCCTTGGTCTTTCTGGTGACGCTAGTTG
TGACAGGTTTTTTAATTGACCACTGGCGAAATCGAAAAGTTAGTGCTAGGCTGGCAATCATCTTGATGGGCTTATTCTTC
ATAACTAAAAATCCACCGACTCCTTCGATAACCATGGTGGATGTTGGCCAGGGGGATAGTATTTTCTTACAAGATAAGTT
TAATCGACGCAATATTTTAATCGATACAGGTGGCAGGATTGAATTAGGTAAGAAGAAAAAGTGGCAGGAGCGTAACATTG
CAGCACCAGCTGAAAAGACTTTAATTCCTTATTTGAAAAGTCGGGGTGTGGGTCAGATTGATACTTTGGTTCTAACCCAT
ACTCACGAGGACCATATGGGTGACCTACTCGCTGTCATCGACCAAATTAAGGTCAAAAATATCATCGTGAGTCAAGGCAG
TCTCAATAATGCCCAATTTGTCAAACTCTTAAAGCAAACCCGAGCTAAGGTTCAAGTGGCCAAGGTCGGTCAACGACTAA
AGATTTTTGACAGCTATTTGGAAGTTCTGTATCCATTGACCCCAGGAGATGGTAAAAATAATGACTCGATCGTCTTGTAT
GGTAAGCTCTATGGGACAAAATTTTTGTTAACAGGTGATTTGGAGGAGACAGGCGAGCGAGAGTTGTTGACACGTTATCC
CAATCTCTCAGTTGATGTTTTAAAAGTAGGGCATCATGGCTCAAAAACGTCATCTTCTGAGTCTTTTATTGAAGCGATTC
GACCAAAAGTCGGATTGATTTCTTGTGGTTTGGATAATCGGTACGGTCATCCAAATATGGAAACTCTCACAACCTTCCAG
AAATATGAGGTTCAAACTTTTCGAACAGATTATCATGGTGCTATAAAATTTAAGAAAAACAGTAAATTTTGGCACATCTC
GACAGTAAAGTGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (214-463)

• Domain of unknown function (DUF4131) (DUF4131) (34-178)

• Metallo-beta-lactamase superfamily (Lactamase_B) (495-703)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Lactococcus lactis subsp. cremoris KW2	51.822	98.8	0.512
comEC/celB	Streptococcus mitis NCTC 12261	46.817	100	0.471
comEC/celB	Streptococcus mitis SK321	46.235	100	0.467
comEC/celB	Streptococcus pneumoniae TIGR4	45.358	100	0.456
comEC/celB	Streptococcus pneumoniae Rx1	43.857	100	0.443
comEC/celB	Streptococcus pneumoniae D39	43.857	100	0.443
comEC/celB	Streptococcus pneumoniae R6	43.857	100	0.443