Detailed information NTG0946269

Bioinformatically predicted

Overview

• Name: ctsF
• Type: Machinery gene
• Locus tag: V6U91_RS07040
• Genome accession: NZ_CP147221
• Coordinates: 1388249..1389430 (-)
• Length: 393 a.a.
• NCBI ID: WP_002851165.1
• Uniprot ID: Q7WYI5
• Organism: Campylobacter jejuni strain LZ-CJ
• Function: type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1383249..1394430

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6U91_RS07010	-	1383791..1384132 (+)	342	WP_002784057.1	hypothetical protein	-
V6U91_RS07015	flgM	1384195..1384392 (+)	198	WP_002779262.1	flagellar biosynthesis anti-sigma factor FlgM	-
V6U91_RS07020	-	1384437..1384871 (+)	435	WP_002826016.1	flagellar protein FlgN	-
V6U91_RS07025	flgK	1384881..1386707 (+)	1827	WP_002867029.1	flagellar hook-associated protein FlgK	-
V6U91_RS07030	-	1386724..1387488 (+)	765	WP_002877433.1	TIGR02757 family protein	-
V6U91_RS07035	-	1387492..1388256 (+)	765	WP_002867032.1	TSUP family transporter	-
V6U91_RS07040	ctsF	1388249..1389430 (-)	1182	WP_002851165.1	type II secretion system F family protein	Machinery gene
V6U91_RS07045	ctsE	1389427..1390986 (-)	1560	WP_002867035.1	GspE/PulE family protein	Machinery gene
V6U91_RS07050	ctsX	1390976..1391563 (-)	588	WP_002867036.1	hypothetical protein	Machinery gene
V6U91_RS07055	ctsP	1391567..1392175 (-)	609	WP_002862129.1	ATP-binding protein	Machinery gene
V6U91_RS07060	ctsD	1392168..1393580 (-)	1413	WP_002867037.1	pilus (MSHA type) biogenesis protein MshL	Machinery gene
V6U91_RS07065	ctsR	1393558..1393869 (-)	312	WP_002862131.1	hypothetical protein	Machinery gene

Sequence

Protein

• Length: 393 a.a.
• Molecular weight: 45764.35 Da
• Isoelectric Point: 9.0938

>NTDB_id=946269 V6U91_RS07040 WP_002851165.1 1388249..1389430(-) (ctsF) [Campylobacter jejuni strain LZ-CJ]
MKFYEVEFLKNNQNYTKTIKAENLNTAQAKALSKNWKIIDIKEIQKSNFQRLKDENFILFFKELALLCEVGLSVQEAIRE
LYFMHSCKIMKKILDNLILAQNLNQAFENANFGLNRAELALIKTAEKTGKISEVFSQISKLREKSLESQKQLKKAFRYPT
LVFLSIIGAFLFLMLFVVPNFKDLFENLGASLPFITHVMLEIYNFLDDYGIFCIFLFVIFIVMLILAYKNFHSFAFSCDF
LFLKVPLISRLIIYNQNYYFFMVFSLLLKNGISISKAFDLAIIGLENKFLIFQYKKLFSFIDSGLELSQAFKKIDIFDSL
VFSMLSVAMKSGRLEVLSEEIAKYYQQKSENLMDRFLIFLEPMMTLFVALLVLFLALGIFLPMWELSSGVNFN

Nucleotide

• Length: 1182 bp

>NTDB_id=946269 V6U91_RS07040 WP_002851165.1 1388249..1389430(-) (ctsF) [Campylobacter jejuni strain LZ-CJ]
ATGAAATTTTATGAAGTAGAATTTCTTAAAAACAATCAAAATTATACAAAAACTATAAAAGCTGAAAATTTAAATACAGC
ACAAGCAAAAGCCTTATCAAAGAATTGGAAAATCATTGATATAAAAGAAATTCAAAAATCTAATTTTCAGAGATTAAAGG
ATGAAAATTTTATACTCTTTTTTAAAGAGCTAGCTTTGTTGTGTGAAGTTGGATTAAGTGTTCAAGAAGCGATTAGAGAA
TTATATTTTATGCATTCTTGCAAGATTATGAAAAAAATATTAGACAATTTAATTTTAGCTCAAAATCTAAATCAAGCTTT
TGAAAATGCTAATTTTGGATTAAATCGTGCGGAGTTAGCTTTGATTAAAACGGCTGAAAAGACAGGAAAAATCAGTGAAG
TGTTTAGTCAAATTTCTAAACTTCGAGAAAAAAGCTTAGAGAGTCAAAAACAATTAAAAAAGGCTTTTAGATATCCTACT
TTGGTTTTTTTAAGTATTATCGGAGCATTTTTGTTTTTAATGCTTTTTGTAGTGCCTAATTTTAAAGATTTATTTGAAAA
TTTAGGCGCGAGTTTGCCTTTTATCACGCATGTAATGTTAGAAATTTATAATTTTTTAGATGACTATGGAATTTTTTGCA
TATTTTTGTTTGTTATTTTTATTGTTATGCTTATTTTAGCTTATAAAAATTTTCATTCTTTTGCTTTTTCTTGCGATTTT
TTATTTTTAAAAGTACCTTTGATTTCTCGTTTGATTATTTATAATCAAAATTATTATTTTTTTATGGTTTTTTCTTTGCT
TTTAAAAAATGGAATTTCAATATCTAAAGCTTTTGATTTAGCTATTATAGGGCTTGAAAATAAATTTTTAATTTTTCAGT
ATAAAAAACTTTTTAGTTTTATAGATTCTGGTCTTGAGTTAAGTCAGGCTTTTAAAAAGATTGATATTTTTGATTCTTTG
GTGTTTTCTATGCTTAGTGTTGCGATGAAAAGTGGGAGACTTGAAGTATTAAGTGAAGAAATTGCCAAATATTATCAACA
AAAAAGCGAAAATTTGATGGATAGATTTTTGATTTTTTTAGAGCCTATGATGACTTTATTTGTAGCGCTTTTAGTTTTGT
TTTTGGCTTTAGGTATATTTTTACCTATGTGGGAGCTTAGCTCAGGGGTCAATTTTAACTAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein F (T2SSF) (261-382)

• Type II secretion system (T2SS), protein F (T2SSF) (60-179)

3D structure

• AlphaFold DB: Q7WYI5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ctsF	Campylobacter jejuni subsp. jejuni 81-176	99.235	99.746	0.99