Detailed information NTG0944265

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: V9W60_RS16620
• Genome accession: NZ_CP146759
• Coordinates: 3217653..3218828 (-)
• Length: 391 a.a.
• NCBI ID: WP_024719243.1
• Uniprot ID: A0A081LEM4
• Organism: Bacillus altitudinis strain JJ61
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3212653..3223828

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V9W60_RS16590 (V9W60_16590)	-	3212829..3213248 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
V9W60_RS16595 (V9W60_16595)	comFC	3213305..3213991 (-)	687	WP_198527543.1	ComF family protein	Machinery gene
V9W60_RS16600 (V9W60_16600)	-	3213988..3214281 (-)	294	WP_008348267.1	competence protein ComFB	-
V9W60_RS16605 (V9W60_16605)	comFA	3214346..3215473 (-)	1128	WP_041091472.1	DEAD/DEAH box helicase	Machinery gene
V9W60_RS16610 (V9W60_16610)	-	3215845..3216687 (-)	843	WP_024719242.1	DegV family protein	-
V9W60_RS16615 (V9W60_16615)	degU	3216899..3217588 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
V9W60_RS16620 (V9W60_16620)	degS	3217653..3218828 (-)	1176	WP_024719243.1	sensor histidine kinase	Regulator
V9W60_RS16625 (V9W60_16625)	-	3219050..3219718 (+)	669	WP_335364162.1	YigZ family protein	-
V9W60_RS16630 (V9W60_16630)	-	3219703..3220800 (+)	1098	WP_024719244.1	LCP family protein	-
V9W60_RS16635 (V9W60_16635)	-	3220839..3221906 (-)	1068	WP_024719245.1	MraY family glycosyltransferase	-
V9W60_RS16640 (V9W60_16640)	-	3222041..3223288 (-)	1248	WP_144666230.1	glycosyltransferase	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45550.27 Da
• Isoelectric Point: 5.8757

>NTDB_id=944265 V9W60_RS16620 WP_024719243.1 3217653..3218828(-) (degS) [Bacillus altitudinis strain JJ61]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTENERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=944265 V9W60_RS16620 WP_024719243.1 3217653..3218828(-) (degS) [Bacillus altitudinis strain JJ61]
ATGACAACACCTAAAATGGATCCGAAGTTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGTAAGGA
CGAAGTATTTAGAATCGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTCAAGCAAATTAAACAGCAAG
TCAACGAAGTAATTGATTTTGGGGATAAACTAGAAGTACATACGAGACATGCTAGAAATCGATTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGAGAAGCCTATGAAAAAGCACATAACCTGCAAGTAGAATTGACCATGAT
CCAGCAGCGCGAAAAACAGCTGAGAGAAAGAAGAGATGATCTCGAAAGACGATTGTTAAGCTTACAAGATGTCATTGAAC
GTTCAGAAACGCTTGTGAGCCAGATCACGGTCGTCCTCAACTACTTGAACCAAGATTTACGTCAGGTCGGTGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGACTAAGAATTATTGAAGCCCAGGAAGAAGAGCGCAAAAGGGTATCACGAGA
AATCCATGATGGACCTGCTCAGATGCTGGCAAACGTGATGATGCGTTCAGAACTAATTGAACGGATTTTTAGAGACCGTG
GAACAGAAGAAGGTTTTAAAGAAATTAGAAGTCTAAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTCATTCCGACATTGCGAAAATACTTAAACACAATTGAAGAATA
TGATGGAAAAACCAAAATTACGTTCCAATGCCTAGGGGATACAGAAAATGAAAGAATTGCTTCTCAATTCGAAGTGGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCATTGAAGCATTCCGAAGCTGAAGAAATCTCTGTAAAAGTAGAAGTG
ACAAAAGACTTTGTCACGTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAACAAAAACAA
ATCCTTCGGTTTACTTGGCATGAAAGAACGCGTAGACTTACTGGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTAGAGTACCGTTAACATTACAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A0A081LEM4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841