Detailed information NTG0943820

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: RdKW20_RS00045
• Genome accession: NZ_CP146693
• Coordinates: 14476..15597 (+)
• Length: 373 a.a.
• NCBI ID: WP_005693325.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain Rd-KW20
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 9476..20597

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RdKW20_RS00030 (RdKW20_000006)	leuC	9625..11034 (-)	1410	WP_005693329.1	3-isopropylmalate dehydratase large subunit	-
RdKW20_RS00035 (RdKW20_000007)	leuB	11210..12286 (-)	1077	WP_005693328.1	3-isopropylmalate dehydrogenase	-
RdKW20_RS00040 (RdKW20_000008)	leuA	12372..13919 (-)	1548	WP_005693326.1	2-isopropylmalate synthase	-
RdKW20_RS00045 (RdKW20_000009)	dprA	14476..15597 (+)	1122	WP_005693325.1	DNA-processing protein DprA	Machinery gene
RdKW20_RS00050 (RdKW20_000010)	yaaA	15651..16427 (+)	777	WP_010869102.1	peroxide stress protein YaaA	-
RdKW20_RS00055 (RdKW20_000011)	-	16420..17001 (+)	582	WP_005693323.1	hypothetical protein	-
RdKW20_RS00060 (RdKW20_000012)	pfkA	17097..18062 (+)	966	WP_005664214.1	6-phosphofructokinase	-
RdKW20_RS00065 (RdKW20_000013)	smpB	18301..18786 (+)	486	WP_005647965.1	SsrA-binding protein SmpB	-
RdKW20_RS00070 (RdKW20_000014)	fis	18881..19180 (-)	300	WP_005651583.1	DNA-binding transcriptional regulator Fis	-
RdKW20_RS00075 (RdKW20_000015)	dusB	19161..20153 (-)	993	WP_010869101.1	tRNA dihydrouridine synthase DusB	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 41639.79 Da
• Isoelectric Point: 6.7679

>NTDB_id=943820 RdKW20_RS00045 WP_005693325.1 14476..15597(+) (dprA) [Haemophilus influenzae strain Rd-KW20]
MNDITYTLLRLMQVPKLGGVGIDKILSNITLNELLNYDDVAFRQMGWGAIQIRRWFKPEAKFIEPALVWSQKEGNHLVNY
FSPFYPFLLKQTASFPPLLFVKGNLTALSQRQMAMVGSRYCTTYGEYWAKHFATELSLAGFTITSGLALGIDGHCHQAVV
NIQGQTIAVLGSGLEQIYPSKHQRLSAQIIENNGALVSEFLPNQAPIAANFPRRNRIISGLSVGTLVVEATEKSGSLITA
RYALEQNREVFAVPGNIQNKSSQGCHRLIKQGAMLVENAKDILETLYQHSIHSQTEIDFDQIAVPNYTPPPDPRRLVEAP
SHPKLYSRIGYTPVSIDDLAEEFNLSVDVLLVQLLDLELQDLIISENGLYKRV

Nucleotide

• Length: 1122 bp

>NTDB_id=943820 RdKW20_RS00045 WP_005693325.1 14476..15597(+) (dprA) [Haemophilus influenzae strain Rd-KW20]
ATGAATGACATTACCTACACATTACTCCGTTTAATGCAAGTGCCTAAACTTGGCGGCGTTGGCATTGATAAAATTTTGTC
CAATATTACCTTAAATGAATTACTTAATTATGATGATGTTGCTTTCCGACAAATGGGGTGGGGAGCCATCCAAATTCGCC
GTTGGTTCAAGCCTGAAGCAAAATTTATTGAGCCTGCACTTGTGTGGTCACAAAAAGAGGGAAATCATTTAGTGAATTAT
TTTTCCCCTTTTTATCCCTTTTTGTTGAAACAGACCGCAAGTTTTCCGCCACTATTATTTGTAAAAGGAAATTTAACCGC
ACTTTCACAACGCCAAATGGCAATGGTTGGAAGCCGTTATTGCACGACTTACGGAGAATATTGGGCAAAACATTTTGCGA
CAGAACTTTCATTAGCTGGCTTTACGATTACTAGTGGACTTGCATTAGGAATTGATGGACATTGCCATCAAGCTGTGGTC
AATATTCAAGGACAAACTATTGCGGTTTTAGGCAGTGGATTAGAACAAATCTATCCCTCTAAACATCAAAGATTATCGGC
ACAAATCATCGAAAATAATGGCGCATTAGTCTCTGAGTTCTTACCAAACCAAGCCCCCATTGCCGCTAATTTCCCACGTC
GTAATCGGATTATTAGCGGGCTTTCAGTCGGCACGCTTGTTGTTGAAGCCACAGAAAAAAGCGGCTCGCTTATTACTGCG
CGATATGCGTTGGAACAAAACCGAGAGGTTTTTGCTGTGCCGGGAAACATTCAAAATAAATCAAGTCAAGGTTGTCATCG
CCTAATTAAACAAGGTGCAATGTTGGTAGAAAATGCAAAGGACATTTTGGAAACTCTCTACCAACATTCAATCCATAGCC
AAACTGAAATTGATTTTGACCAGATCGCCGTGCCTAATTACACGCCACCACCTGATCCTCGTCGATTAGTAGAAGCACCA
AGCCACCCGAAACTTTATTCGCGTATTGGTTACACGCCAGTGAGCATTGATGATTTAGCGGAAGAATTTAATTTAAGCGT
CGATGTTTTGCTTGTTCAGTTGCTCGATCTTGAGTTGCAAGATCTTATCATAAGTGAAAATGGGTTATATAAACGCGTTT
AG

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (311-366)

• DNA recombination-mediator protein A (DNA_processg_A) (71-277)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	100	100	1
dprA	Glaesserella parasuis strain SC1401	52.011	93.298	0.485
dprA	Vibrio campbellii strain DS40M4	43.617	100	0.44
dprA	Vibrio cholerae strain A1552	43.288	97.855	0.424
dprA	Legionella pneumophila strain ERS1305867	40.634	93.029	0.378