Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   V5M36_RS11720 Genome accession   NZ_CP145906
Coordinates   2583615..2583998 (-) Length   127 a.a.
NCBI ID   WP_338559196.1    Uniprot ID   -
Organism   Acinetobacter sp. KS-LM10     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2578615..2588998
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V5M36_RS11705 (V5M36_11705) - 2580587..2582656 (-) 2070 WP_338559191.1 methyl-accepting chemotaxis protein -
  V5M36_RS11710 (V5M36_11710) - 2582691..2583221 (-) 531 WP_338559193.1 chemotaxis protein CheW -
  V5M36_RS11715 (V5M36_11715) - 2583225..2583593 (-) 369 WP_338559195.1 response regulator -
  V5M36_RS11720 (V5M36_11720) pilG 2583615..2583998 (-) 384 WP_338559196.1 twitching motility response regulator PilG Regulator
  V5M36_RS11725 (V5M36_11725) - 2584260..2584910 (+) 651 WP_338559198.1 hypothetical protein -
  V5M36_RS11730 (V5M36_11730) - 2584945..2586066 (+) 1122 WP_338559200.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14165.21 Da        Isoelectric Point: 5.1753

>NTDB_id=941068 V5M36_RS11720 WP_338559196.1 2583615..2583998(-) (pilG) [Acinetobacter sp. KS-LM10]
MEDNSKGLKVMVIDDSKTIRRTAETLLQREGYNVVTAVDGFEALSKIADANPDIVFVDIMMPRLDGYQTCALIKNSLNYQ
HIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVTS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=941068 V5M36_RS11720 WP_338559196.1 2583615..2583998(-) (pilG) [Acinetobacter sp. KS-LM10]
ATGGAAGATAACTCAAAGGGTCTCAAAGTAATGGTTATTGATGACTCAAAAACCATTCGTCGGACAGCTGAGACATTATT
ACAGCGTGAAGGATATAACGTGGTTACTGCTGTTGATGGTTTTGAAGCATTGTCAAAGATTGCTGATGCGAATCCAGATA
TTGTATTTGTCGATATTATGATGCCTCGTTTAGATGGTTATCAAACCTGTGCGCTTATTAAAAACTCTTTAAACTATCAA
CATATTCCTGTGATTATGTTGTCGAGTAAAGACGGTTTATTTGATCAAGCAAAAGGACGAGTTGTTGGCTCTGATGAATA
TTTAACTAAACCATTTAGTAAAGATGAATTATTAAATGCAATTCGTAATCATGTGACGTCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

91.339

100

0.913
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

40.351

89.764

0.362
  chiS Vibrio cholerae strain A1552

36.22

100

0.362