Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | V6U69_RS00750 | Genome accession | NZ_CP145867 |
| Coordinates | 135681..136637 (+) | Length | 318 a.a. |
| NCBI ID | WP_410533909.1 | Uniprot ID | - |
| Organism | Streptococcus salivarius strain KSS10 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 130681..141637
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V6U69_RS00710 (V6U69_00710) | - | 131579..131941 (+) | 363 | WP_002885749.1 | DUF1033 family protein | - |
| V6U69_RS00715 (V6U69_00715) | comYA | 132021..132962 (+) | 942 | WP_002885658.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| V6U69_RS00720 (V6U69_00720) | comYB | 132844..133944 (+) | 1101 | WP_155115607.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| V6U69_RS00725 (V6U69_00725) | comYC | 133953..134267 (+) | 315 | WP_037611125.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| V6U69_RS00730 (V6U69_00730) | comYD | 134227..134655 (+) | 429 | WP_260312930.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| V6U69_RS00735 (V6U69_00735) | comGE | 134687..134917 (+) | 231 | WP_002887015.1 | competence type IV pilus minor pilin ComGE | - |
| V6U69_RS00740 (V6U69_00740) | comYF | 134904..135341 (+) | 438 | WP_022496100.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| V6U69_RS00745 (V6U69_00745) | comGG | 135319..135636 (+) | 318 | WP_021144683.1 | competence type IV pilus minor pilin ComGG | - |
| V6U69_RS00750 (V6U69_00750) | comYH | 135681..136637 (+) | 957 | WP_410533909.1 | class I SAM-dependent methyltransferase | Machinery gene |
| V6U69_RS00755 (V6U69_00755) | - | 136694..137887 (+) | 1194 | WP_410533911.1 | acetate kinase | - |
| V6U69_RS00760 (V6U69_00760) | - | 138138..138335 (+) | 198 | WP_013991261.1 | helix-turn-helix transcriptional regulator | - |
| V6U69_RS00765 (V6U69_00765) | - | 138347..139003 (+) | 657 | WP_410533913.1 | CPBP family intramembrane glutamic endopeptidase | - |
| V6U69_RS00770 (V6U69_00770) | - | 139077..139523 (+) | 447 | WP_410533915.1 | CAAX protease | - |
| V6U69_RS00775 (V6U69_00775) | - | 139636..140298 (+) | 663 | WP_410533917.1 | type II CAAX prenyl endopeptidase Rce1 family protein | - |
| V6U69_RS00780 (V6U69_00780) | proC | 140325..141095 (-) | 771 | WP_410533919.1 | pyrroline-5-carboxylate reductase | - |
Sequence
Protein
Download Length: 318 a.a. Molecular weight: 35738.64 Da Isoelectric Point: 4.4154
>NTDB_id=940760 V6U69_RS00750 WP_410533909.1 135681..136637(+) (comYH) [Streptococcus salivarius strain KSS10]
MNFEAIETAFELLLENVQTIENDLGTHAYDALIEQNSYYLGAEVANEVIIKNNEKLRALNLSKEEWRRAFQFLFIKLGQL
EALQANHQFTPDAIGFIILYLLEGLTKGDQLDILEIGSGTGNLAETLLNNSQKNLNYMGMEVDDLLIDLSASIADVVNSS
AVYIQEDAVRPHILKESDVIISDLPVGYYPNDEIASRFKVAATGEHTYAHHLLMEQSLKYLKKDGIAILLAPTNLLTSPQ
SDLLKKWLSGYADIIAVITLPEAAFGNKRNMKSIFVLKKQTENAPETFVYPLSDLQNSEVLKDFTENFQKWKSDNSIF
MNFEAIETAFELLLENVQTIENDLGTHAYDALIEQNSYYLGAEVANEVIIKNNEKLRALNLSKEEWRRAFQFLFIKLGQL
EALQANHQFTPDAIGFIILYLLEGLTKGDQLDILEIGSGTGNLAETLLNNSQKNLNYMGMEVDDLLIDLSASIADVVNSS
AVYIQEDAVRPHILKESDVIISDLPVGYYPNDEIASRFKVAATGEHTYAHHLLMEQSLKYLKKDGIAILLAPTNLLTSPQ
SDLLKKWLSGYADIIAVITLPEAAFGNKRNMKSIFVLKKQTENAPETFVYPLSDLQNSEVLKDFTENFQKWKSDNSIF
Nucleotide
Download Length: 957 bp
>NTDB_id=940760 V6U69_RS00750 WP_410533909.1 135681..136637(+) (comYH) [Streptococcus salivarius strain KSS10]
ATGAATTTTGAAGCAATTGAGACAGCCTTTGAGCTGTTGTTAGAAAATGTCCAAACCATTGAAAATGATCTTGGAACCCA
TGCTTACGATGCGCTTATTGAGCAAAATTCCTATTATTTGGGGGCTGAGGTAGCTAATGAAGTCATCATCAAAAACAACG
AAAAATTACGTGCCCTTAATCTGAGTAAAGAAGAATGGCGTCGTGCCTTCCAGTTTTTGTTTATCAAGTTAGGGCAGTTG
GAAGCCTTACAAGCAAATCACCAATTTACACCTGATGCGATTGGATTTATCATTCTTTACCTACTCGAAGGTTTGACCAA
GGGCGATCAATTAGATATTTTGGAAATTGGGTCAGGTACAGGAAACTTGGCTGAAACTCTTCTAAATAATAGTCAGAAAA
ACCTTAATTATATGGGAATGGAAGTTGACGATCTCCTTATCGATTTGTCAGCTAGTATTGCTGATGTGGTGAATTCGAGT
GCAGTTTACATTCAAGAAGATGCTGTTCGACCACATATTCTCAAAGAGAGTGATGTTATTATTAGTGACCTACCTGTTGG
TTACTACCCTAATGATGAAATTGCGAGTCGTTTCAAGGTTGCAGCAACTGGTGAACACACCTATGCCCATCACCTTCTCA
TGGAGCAATCACTCAAGTACTTGAAGAAAGATGGTATTGCTATTCTTTTGGCACCAACTAATCTTTTGACAAGCCCACAA
AGTGACTTGCTTAAGAAATGGCTATCAGGCTATGCTGATATTATTGCTGTTATCACTCTTCCAGAAGCAGCTTTTGGCAA
TAAACGTAACATGAAGTCTATCTTTGTGCTTAAAAAACAAACTGAAAATGCTCCTGAGACCTTTGTTTATCCACTTAGCG
ATTTGCAAAACTCAGAGGTCCTCAAAGATTTTACAGAGAATTTCCAAAAATGGAAATCAGATAATTCCATTTTCTAG
ATGAATTTTGAAGCAATTGAGACAGCCTTTGAGCTGTTGTTAGAAAATGTCCAAACCATTGAAAATGATCTTGGAACCCA
TGCTTACGATGCGCTTATTGAGCAAAATTCCTATTATTTGGGGGCTGAGGTAGCTAATGAAGTCATCATCAAAAACAACG
AAAAATTACGTGCCCTTAATCTGAGTAAAGAAGAATGGCGTCGTGCCTTCCAGTTTTTGTTTATCAAGTTAGGGCAGTTG
GAAGCCTTACAAGCAAATCACCAATTTACACCTGATGCGATTGGATTTATCATTCTTTACCTACTCGAAGGTTTGACCAA
GGGCGATCAATTAGATATTTTGGAAATTGGGTCAGGTACAGGAAACTTGGCTGAAACTCTTCTAAATAATAGTCAGAAAA
ACCTTAATTATATGGGAATGGAAGTTGACGATCTCCTTATCGATTTGTCAGCTAGTATTGCTGATGTGGTGAATTCGAGT
GCAGTTTACATTCAAGAAGATGCTGTTCGACCACATATTCTCAAAGAGAGTGATGTTATTATTAGTGACCTACCTGTTGG
TTACTACCCTAATGATGAAATTGCGAGTCGTTTCAAGGTTGCAGCAACTGGTGAACACACCTATGCCCATCACCTTCTCA
TGGAGCAATCACTCAAGTACTTGAAGAAAGATGGTATTGCTATTCTTTTGGCACCAACTAATCTTTTGACAAGCCCACAA
AGTGACTTGCTTAAGAAATGGCTATCAGGCTATGCTGATATTATTGCTGTTATCACTCTTCCAGAAGCAGCTTTTGGCAA
TAAACGTAACATGAAGTCTATCTTTGTGCTTAAAAAACAAACTGAAAATGCTCCTGAGACCTTTGTTTATCCACTTAGCG
ATTTGCAAAACTCAGAGGTCCTCAAAGATTTTACAGAGAATTTCCAAAAATGGAAATCAGATAATTCCATTTTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
70.476 |
99.057 |
0.698 |
| comYH | Streptococcus mutans UA140 |
70.476 |
99.057 |
0.698 |