Detailed information NTG0940741

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: V6U68_RS09315
• Genome accession: NZ_CP145866
• Coordinates: 2003541..2003933 (-)
• Length: 130 a.a.
• NCBI ID: WP_002885697.1
• Uniprot ID: A0AB33ZFB8
• Organism: Streptococcus salivarius strain KSS9
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1998541..2008933

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6U68_RS09275 (V6U68_09255)	dapD	1998607..1999305 (-)	699	WP_002886999.1	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	-
V6U68_RS09280 (V6U68_09260)	-	1999391..2000143 (-)	753	WP_211180856.1	HAD family hydrolase	-
V6U68_RS09285 (V6U68_09265)	-	2000257..2001096 (-)	840	WP_002891996.1	methyltransferase domain-containing protein	-
V6U68_RS09295 (V6U68_09275)	-	2001519..2001677 (+)	159	WP_002892000.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
V6U68_RS09300 (V6U68_09280)	-	2001698..2001865 (+)	168	WP_195435959.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
V6U68_RS09305 (V6U68_09285)	-	2001913..2002167 (+)	255	WP_002892006.1	hypothetical protein	-
V6U68_RS09310 (V6U68_09290)	tadA	2002253..2002771 (-)	519	WP_060971580.1	tRNA adenosine(34) deaminase TadA	-
V6U68_RS09315 (V6U68_09295)	ssbA	2003541..2003933 (-)	393	WP_002885697.1	single-stranded DNA-binding protein	Machinery gene
V6U68_RS09320 (V6U68_09300)	-	2004162..2004389 (-)	228	WP_003095911.1	sulfurtransferase TusA family protein	-
V6U68_RS09325 (V6U68_09305)	-	2004404..2005435 (-)	1032	WP_410531673.1	YeeE/YedE family protein	-
V6U68_RS09330 (V6U68_09310)	ytpR	2005573..2006196 (-)	624	WP_013991252.1	YtpR family tRNA-binding protein	-
V6U68_RS09335 (V6U68_09315)	-	2006228..2006752 (-)	525	WP_410531674.1	hypothetical protein	-
V6U68_RS09340 (V6U68_09320)	-	2006756..2007070 (-)	315	WP_013991254.1	thioredoxin family protein	-
V6U68_RS09345 (V6U68_09325)	-	2007067..2007351 (-)	285	WP_014635109.1	DUF4651 domain-containing protein	-
V6U68_RS09350 (V6U68_09330)	pepA	2007451..2008518 (+)	1068	WP_410531675.1	glutamyl aminopeptidase	-

Sequence

Protein

• Length: 130 a.a.
• Molecular weight: 14759.67 Da
• Isoelectric Point: 5.9275

>NTDB_id=940741 V6U68_RS09315 WP_002885697.1 2003541..2003933(-) (ssbA) [Streptococcus salivarius strain KSS9]
MYNKVILIGRLTATPEMVKTASDRSFTRVTVAVNRRYKTQNGEREADFITVVVWGRLAETLASYASKGSLISLDGELRTR
KYDKDGQTHYVTEVLCSSFQLLESRAQRAVRENNPDNDLADLVLEEELPF

Nucleotide

• Length: 393 bp

>NTDB_id=940741 V6U68_RS09315 WP_002885697.1 2003541..2003933(-) (ssbA) [Streptococcus salivarius strain KSS9]
ATGTATAACAAAGTTATTTTAATTGGACGTTTGACAGCTACTCCTGAAATGGTTAAGACTGCTAGCGATAGGTCTTTTAC
ACGTGTCACAGTTGCGGTTAATCGTCGCTATAAGACGCAAAATGGTGAGCGTGAGGCTGACTTTATTACAGTGGTTGTCT
GGGGGCGTTTGGCTGAGACCTTAGCCTCTTATGCTAGCAAGGGGAGTTTAATTTCTCTTGATGGTGAGCTTCGTACCCGT
AAGTACGATAAGGATGGCCAAACCCATTACGTTACTGAGGTGCTTTGTTCCTCTTTCCAACTTCTGGAGAGTCGTGCTCA
GCGTGCTGTTAGGGAAAATAATCCTGACAATGACTTGGCTGACCTCGTCTTGGAAGAAGAACTTCCCTTCTAG

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-102)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	80.916	100	0.815
ssbB/cilA	Streptococcus pneumoniae TIGR4	76.336	100	0.769
ssbB	Streptococcus sobrinus strain NIDR 6715-7	76.336	100	0.769
ssbB/cilA	Streptococcus mitis SK321	75.573	100	0.762
ssbB/cilA	Streptococcus pneumoniae R6	75.573	100	0.762
ssbB/cilA	Streptococcus pneumoniae Rx1	75.573	100	0.762
ssbB/cilA	Streptococcus pneumoniae D39	75.573	100	0.762
ssbB/cilA	Streptococcus mitis NCTC 12261	74.046	100	0.746
ssbB	Lactococcus lactis subsp. cremoris KW2	61.607	86.154	0.531
ssbA	Bacillus subtilis subsp. subtilis str. 168	48.113	81.538	0.392
ssb	Latilactobacillus sakei subsp. sakei 23K	47.17	81.538	0.385