Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   V6T01_RS02150 Genome accession   NZ_CP145856
Coordinates   403084..404898 (+) Length   604 a.a.
NCBI ID   WP_410541211.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS1     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 398084..409898
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6T01_RS02130 (V6T01_02120) gdhA 398701..400053 (+) 1353 WP_037597452.1 NADP-specific glutamate dehydrogenase -
  V6T01_RS02135 (V6T01_02125) - 400547..401881 (+) 1335 WP_410541675.1 hypothetical protein -
  V6T01_RS02140 (V6T01_02130) - 402038..402448 (+) 411 WP_002886693.1 peptide deformylase -
  V6T01_RS02145 (V6T01_02135) rcrR 402637..403080 (+) 444 WP_064523740.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  V6T01_RS02150 (V6T01_02140) rcrP 403084..404898 (+) 1815 WP_410541211.1 ABC transporter ATP-binding protein Regulator
  V6T01_RS02155 (V6T01_02145) rcrQ 404888..406666 (+) 1779 WP_410541210.1 ABC transporter ATP-binding protein Regulator
  V6T01_RS02160 (V6T01_02150) - 406774..407397 (+) 624 WP_155222314.1 GNAT family N-acetyltransferase -
  V6T01_RS02165 (V6T01_02155) - 407547..408170 (+) 624 WP_410531807.1 GTP pyrophosphokinase family protein -
  V6T01_RS02170 (V6T01_02160) - 408172..408849 (+) 678 WP_410531808.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 604 a.a.        Molecular weight: 67015.55 Da        Isoelectric Point: 5.7403

>NTDB_id=940168 V6T01_RS02150 WP_410541211.1 403084..404898(+) (rcrP) [Streptococcus salivarius strain KSS1]
MFKIFKRLTAKELSMIILAVIFVCLNVYLNLKIPDYMSDITTLLSTKGTKASDIFAWNTDAPGMRMLLMSFAGFMASVVV
GFLAARTAASFTTRLRDDIFHQVLDFSDAEIKQFSIPSLLTRTTNDITQLQMVLTMGLQVITQGPIMAIWAITNIADKNG
NWLLALLVAVAVIAILMLFLLIMVMPKQRLIQTLTDKLNSVTRESLTGIRVVRAYNAESYQEDKFEKANTDLTQNNLFIG
RSFALLTPVMTAVSSGLTLAIYWIGAHLIEDVKIPTDPTKIAGAMEDKVHLFSDMVVYSSYAMQVVMGFMMMIVVFFLLP
RAVVAAGRINEVLDTQSSVSYPENSSEKPKDVGTVEFDDVSFRYSETSEPVLEHVSFKAKKGDTVAFIGSTGSGKSTLVN
LIPRFYDATQGTIKVDGVDVRHYDHETLHNIVGYIPQKAVLFSGNITSNMTMGTSNNSPLDDAKIWEALELAQGKDFVEN
KEGQLKAEVAQVGSNFSGGQKQRLAIARALARKPEILIFDDSFSALDYKTDRKLRQELSEKTQDMTKLIVAQRISTIMDA
DQILVLDQGKVVGQGTHKELLANNEVYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1815 bp        

>NTDB_id=940168 V6T01_RS02150 WP_410541211.1 403084..404898(+) (rcrP) [Streptococcus salivarius strain KSS1]
ATGTTTAAAATTTTTAAACGTTTGACAGCAAAAGAGTTAAGCATGATTATCTTAGCTGTGATATTTGTTTGTTTGAACGT
CTATCTAAACTTGAAAATTCCAGACTATATGTCTGACATTACGACCCTCTTATCAACCAAGGGGACTAAGGCGTCGGATA
TTTTTGCCTGGAATACAGATGCCCCAGGGATGCGAATGCTTTTAATGTCTTTTGCGGGGTTTATGGCCTCAGTAGTGGTT
GGTTTCCTAGCTGCCAGAACAGCAGCAAGTTTTACAACCCGTCTTCGTGATGATATCTTCCATCAAGTTCTAGATTTTTC
GGATGCCGAGATTAAGCAATTCTCCATTCCTAGTCTTTTGACCCGCACGACAAATGATATTACCCAATTACAGATGGTAC
TGACCATGGGACTACAGGTCATTACACAGGGGCCTATCATGGCCATTTGGGCGATTACAAATATTGCCGATAAAAATGGA
AATTGGCTCCTTGCCTTGCTTGTCGCTGTGGCAGTGATTGCTATTCTCATGCTTTTCCTCTTAATTATGGTTATGCCTAA
GCAACGCTTGATTCAAACTCTGACCGATAAACTGAATAGCGTAACGCGTGAATCTCTTACAGGAATTCGTGTGGTGCGTG
CCTACAATGCCGAAAGTTATCAAGAGGATAAATTTGAAAAGGCAAATACTGATTTGACCCAAAACAACCTATTTATCGGT
CGTTCTTTTGCTTTGCTAACACCGGTAATGACTGCTGTATCCAGCGGTTTGACACTGGCTATTTATTGGATTGGTGCGCA
TCTGATTGAAGATGTTAAGATTCCAACAGATCCAACGAAAATTGCTGGTGCCATGGAAGACAAGGTCCATCTCTTCTCAG
ATATGGTTGTCTATTCGTCTTATGCCATGCAGGTTGTTATGGGATTCATGATGATGATTGTCGTTTTCTTCCTTCTTCCA
CGTGCCGTTGTAGCAGCTGGCCGTATCAATGAAGTTCTAGATACCCAATCTTCAGTCTCTTACCCTGAAAATAGTTCTGA
AAAACCTAAAGACGTGGGCACTGTCGAATTCGATGATGTTTCCTTCCGTTATTCTGAAACTTCAGAGCCTGTTTTGGAGC
ATGTTAGCTTCAAAGCTAAAAAGGGTGACACGGTTGCCTTTATTGGTTCGACTGGATCTGGTAAATCAACGCTTGTCAAC
CTTATCCCACGATTTTATGATGCCACGCAAGGAACTATCAAGGTTGACGGTGTGGATGTACGACATTATGACCACGAAAC
CTTGCACAATATAGTCGGTTATATTCCACAAAAGGCTGTGCTTTTCTCAGGTAATATCACGTCAAATATGACAATGGGAA
CGAGCAATAATAGTCCCCTAGATGACGCTAAGATTTGGGAAGCTCTCGAATTGGCTCAAGGAAAAGACTTTGTTGAAAAT
AAAGAAGGCCAACTTAAGGCAGAAGTGGCTCAAGTGGGGTCTAACTTCTCAGGTGGCCAGAAGCAACGTTTGGCTATTGC
GCGTGCACTTGCCCGTAAGCCTGAAATCTTGATTTTTGACGATTCCTTCTCAGCTTTGGACTATAAGACCGATCGTAAAC
TGCGTCAAGAATTGTCTGAAAAAACACAAGATATGACCAAGTTGATTGTTGCTCAACGTATCTCTACTATTATGGATGCT
GATCAAATCTTGGTACTTGATCAAGGTAAAGTAGTCGGGCAAGGAACCCACAAGGAACTCTTGGCTAACAATGAGGTTTA
CCAAGAAATTGCTTATTCACAATTGTCTAAGGAGGAGTTAGAAAATGGAAAATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(16-271)

ABC transporter (ABC_tran)

(372-522)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

68.099

100

0.682