Detailed information    

experimental Experimentally validated

Overview


Name   recG   Type   Machinery gene
Locus tag   BSU_15870 Genome accession   NC_000964
Coordinates   1659810..1661858 (+) Length   682 a.a.
NCBI ID   NP_389469.1    Uniprot ID   O34942
Organism   Bacillus subtilis subsp. subtilis str. 168     
Function   homologous recombination   
Homologous recombination

Function


Intramolecular homologous recombination was dependent on RecF, RecB, RecG, RecP, RecH and AddAB functions.


Genomic Context


Location: 1654810..1666858
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSU_15810 (BSU15810) spoVM 1655446..1655526 (+) 81 NP_389463.1 factor required for normal spore cortex and coat synthesis (stage V sporulation) -
  BSU_15820 (BSU15820) rpmB 1655599..1655787 (-) 189 NP_389464.1 ribosomal protein L28 -
  BSU_15830 (BSU15830) yloU 1656064..1656426 (+) 363 NP_389465.1 putative factor involved in malonyl-CoA synthesis -
  BSU_15840 (BSU15840) yloV 1656442..1658103 (+) 1662 NP_389466.1 putative enzyme structurally related to dihydroxyacetone/glyceraldehyde kinase -
  BSU_15850 (BSU15850) sdaAB 1658242..1658904 (+) 663 NP_389467.1 L-serine dehydratase (beta chain) -
  BSU_15860 (BSU15860) sdaAA 1658930..1659832 (+) 903 NP_389468.1 L-serine dehydratase (alpha chain) -
  BSU_15870 (BSU15870) recG 1659810..1661858 (+) 2049 NP_389469.1 branch migrating ATP-dependent DNA helicase involved in DNA recombination and repair Machinery gene
  BSU_15880 (BSU15880) fapR 1661967..1662533 (+) 567 NP_389470.1 transcription factor controlling fatty acid and phospholipid metabolism (FapR-malonyl-Coa) -
  BSU_15890 (BSU15890) plsX 1662547..1663548 (+) 1002 NP_389471.1 phosphate:acyl-ACP acyltransferase -
  BSU_15900 (BSU15900) fabD 1663567..1664520 (+) 954 NP_389472.1 malonyl CoA:acyl carrier protein transacylase -
  BSU_15910 (BSU15910) fabG 1664513..1665253 (+) 741 NP_389473.1 beta-ketoacyl-acyl carrier protein reductase -
  BSU_15920 (BSU15920) acpA 1665337..1665570 (+) 234 NP_389474.1 acyl carrier protein -
  BSU_15930 (BSU15930) rnc 1665710..1666459 (+) 750 NP_389475.1 ribonuclease III -

Sequence


Protein


Download         Length: 682 a.a.        Molecular weight: 78140.72 Da        Isoelectric Point: 7.4260

>NTDB_id=630 BSU_15870 NP_389469.1 1659810..1661858(+) (recG) [Bacillus subtilis subsp. subtilis str. 168]
MKQHQQTSIANIKGIGPETEKTLNELGIYDISDLLNYFPYRYDDYELRDLEEVKHDERVTVEGKVHSEPSLTYYGKKRNR
LTFRLLVGHYLITAVCFNRPYLKKKLSLGSVVTVSGKWDKHRQTISVQELKNGPHQEDKSIEPVYSVKENVTVKMMRRFI
QQALTQYADSLPDPLPEKLRKSYKLPDYYQALKAMHQPETREALKLARRRFVYEEFLLFQLKMQAFRKAEREQTQGIRQR
FSNEELMRFIKSLPFPLTNAQSRVLREITADMSSPYRMNRLLQGDVGSGKTAVAAIALYAAILSGYQGALMVPTEILAEQ
HADSLVSLFEKWDVSVALLTSSVKGKRRKELLERLAAGEIDILVGTHALIQDEVEFKALSLVITDEQHRFGVEQRKKLRN
KGQDPDVLFMTATPIPRTLAITVFGEMDVSVIDEMPAGRKRIETYWVKHDMLDRILAFVEKELKQGRQAYIICPLIEESD
KLDVQNAIDVYNMLSDIFRGKWNVGLMHGKLHSDEKDQVMREFSANHCQILVSTTVVEVGVNVPNATIMVIYDADRFGLS
QLHQLRGRVGRGEHQSFCILMADPKSETGKERMRIMSETNDGFELSEKDLELRGPGDFFGKKQSGMPEFKVADMVHDYRA
LETARQDAANLVASDAFWKEPEYAVLRDELLKSGVMDGEKLS

Nucleotide


Download         Length: 2049 bp        

>NTDB_id=630 BSU_15870 NP_389469.1 1659810..1661858(+) (recG) [Bacillus subtilis subsp. subtilis str. 168]
GTGAAACAACATCAGCAAACTAGTATAGCTAACATTAAGGGTATTGGGCCGGAAACAGAAAAAACATTGAATGAACTCGG
TATTTATGACATTTCTGATCTTCTGAATTATTTCCCTTATCGCTATGATGACTACGAGCTGAGGGATTTAGAAGAAGTAA
AGCATGATGAAAGAGTCACAGTCGAAGGGAAGGTTCATTCAGAGCCTTCTCTTACCTATTACGGAAAAAAACGAAACAGG
CTGACATTCAGGCTTCTGGTCGGCCACTATTTAATCACAGCCGTATGTTTTAACCGGCCTTATTTGAAGAAGAAGCTTTC
GCTCGGCTCTGTGGTGACGGTTTCAGGTAAATGGGACAAGCACCGCCAAACCATCTCTGTTCAGGAGTTGAAAAACGGGC
CGCATCAAGAAGACAAAAGCATTGAACCAGTGTATTCTGTGAAAGAAAATGTTACCGTCAAAATGATGAGGCGCTTTATT
CAGCAGGCGCTGACCCAATATGCAGACTCACTTCCTGATCCTCTTCCGGAAAAGCTAAGAAAAAGCTATAAACTGCCTGA
CTATTATCAAGCGTTAAAAGCAATGCACCAGCCTGAAACAAGGGAAGCATTAAAGCTTGCCAGACGGCGGTTTGTTTATG
AAGAATTTTTGTTGTTTCAGTTGAAAATGCAGGCGTTCCGAAAGGCGGAAAGAGAGCAGACACAAGGGATACGGCAGCGT
TTTTCAAACGAAGAACTCATGAGATTTATCAAAAGCCTCCCGTTTCCCCTCACAAACGCCCAGTCACGCGTTCTTCGCGA
AATAACAGCAGACATGTCTTCTCCATACAGAATGAACCGTCTTCTTCAAGGGGACGTTGGATCAGGAAAAACGGCAGTCG
CCGCCATTGCACTGTATGCCGCGATCCTATCCGGATACCAAGGAGCGCTCATGGTGCCGACAGAAATTCTGGCCGAGCAG
CATGCTGATTCGCTCGTTTCGCTATTTGAAAAATGGGACGTCAGCGTTGCTCTTTTGACAAGCTCTGTTAAAGGAAAGCG
GCGAAAAGAACTGCTTGAGCGTCTTGCGGCGGGTGAGATTGATATTCTTGTAGGAACCCATGCTTTAATCCAAGACGAGG
TGGAGTTTAAGGCGTTGAGTCTCGTTATTACTGATGAACAGCACAGATTTGGAGTTGAGCAGCGCAAAAAGCTTCGGAAC
AAAGGGCAGGATCCCGATGTTCTCTTTATGACAGCCACTCCAATCCCAAGAACATTAGCGATCACAGTATTCGGTGAAAT
GGATGTATCTGTCATTGATGAGATGCCGGCTGGACGAAAGCGAATTGAAACCTATTGGGTAAAACATGACATGCTTGATC
GTATTTTGGCATTTGTCGAAAAAGAATTAAAGCAAGGCAGGCAGGCTTATATCATCTGTCCGCTGATTGAAGAATCAGAT
AAGCTTGATGTGCAAAACGCCATTGACGTGTACAATATGCTTTCTGATATTTTTCGGGGAAAATGGAATGTCGGCCTTAT
GCATGGAAAGCTGCATTCCGATGAAAAAGATCAGGTCATGAGAGAATTCAGCGCAAATCACTGTCAAATTCTCGTATCAA
CCACTGTTGTGGAGGTTGGCGTAAATGTTCCGAATGCAACAATTATGGTGATTTATGACGCCGACCGTTTCGGACTATCA
CAGCTTCACCAGCTGCGCGGCCGTGTTGGACGGGGTGAGCATCAATCTTTCTGTATTCTGATGGCTGATCCAAAATCAGA
AACAGGGAAAGAACGGATGAGGATCATGTCGGAGACCAATGACGGTTTCGAGCTGTCTGAAAAGGATCTGGAACTGAGAG
GTCCCGGTGATTTCTTCGGGAAAAAACAAAGCGGAATGCCGGAATTTAAAGTGGCGGACATGGTTCATGATTACAGAGCG
CTTGAAACGGCAAGGCAGGATGCTGCGAATCTTGTGGCTTCTGACGCGTTCTGGAAGGAGCCGGAATACGCTGTGTTAAG
AGATGAATTGCTGAAGAGCGGAGTAATGGACGGGGAAAAATTAAGCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB O34942

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG/mmsA Streptococcus pneumoniae R36A

48.968

100

0.495

  recG/mmsA Streptococcus pneumoniae R6

48.968

100

0.495

  recG Neisseria meningitidis strain C311

39.542

96.324

0.381


References


[1] Rubén Torres et al. (2021) DisA Limits RecG Activities at Stalled or Reversed Replication Forks. Cells 10(6):1357. [PMID: 34073022]
[2] Rubén Torres et al. (2017) Interplay between Bacillus subtilis RecD2 and the RecG or RuvAB helicase in recombinational repair. DNA Repair 55:40-46. [PMID: 28527403]
[3] Humberto Sanchez et al. (2007) Bacillus subtilis RecG branch migration translocase is required for DNA repair and chromosomal segregation. Molecular Microbiology 65(4):920-35. [PMID: 17640277]
[4] Begoña Carrasco et al. (2004) Genetic recombination in Bacillus subtilis 168: contribution of Holliday junction processing functions in chromosome segregation. Journal of Bacteriology 186(17):5557-66. [PMID: 15317759]
[5] J C Alonso et al. (1992) Intramolecular homologous recombination in Bacillus subtilis 168. Molecular & General Genetics : MGG 236(1):60-4. [PMID: 1494351]