Detailed information NTG0938679

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: LBA42_RS02390
• Genome accession: NZ_CP145437
• Coordinates: 480207..481160 (-)
• Length: 317 a.a.
• NCBI ID: WP_000495896.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain HAC 39-1996
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 475207..486160

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LBA42_RS02365 (LBA42_02365)	-	475696..475791 (-)	96	Protein_469	IS630 family transposase	-
LBA42_RS02370 (LBA42_02370)	-	476203..476544 (+)	342	Protein_470	IS3 family transposase	-
LBA42_RS02375 (LBA42_02375)	prsA	476663..477604 (-)	942	WP_000727935.1	peptidylprolyl isomerase PrsA	-
LBA42_RS02380 (LBA42_02380)	-	477671..478384 (-)	714	WP_001810028.1	O-methyltransferase	-
LBA42_RS02385 (LBA42_02385)	pepF	478386..480188 (-)	1803	WP_000244124.1	oligoendopeptidase F	Regulator
LBA42_RS02390 (LBA42_02390)	coiA	480207..481160 (-)	954	WP_000495896.1	competence protein CoiA	Machinery gene
LBA42_RS02395 (LBA42_02395)	tehB	481233..482093 (-)	861	WP_000413762.1	SAM-dependent methyltransferase TehB	-
LBA42_RS02400 (LBA42_02400)	smpB	482109..482576 (-)	468	WP_001051750.1	SsrA-binding protein SmpB	-
LBA42_RS02405 (LBA42_02405)	rnr	482539..484893 (-)	2355	WP_000654871.1	ribonuclease R	-
LBA42_RS02410 (LBA42_02410)	secG	484995..485228 (-)	234	WP_000282517.1	preprotein translocase subunit SecG	-
LBA42_RS02415 (LBA42_02415)	rpmG	485268..485417 (-)	150	WP_001810029.1	50S ribosomal protein L33	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38243.86 Da
• Isoelectric Point: 8.9865

>NTDB_id=938679 LBA42_RS02390 WP_000495896.1 480207..481160(-) (coiA) [Streptococcus pneumoniae strain HAC 39-1996]
MFVARDARGELVNVLEDKLEKQAYTCPACGGQIHLRQGPSVRTHFAHKSLKDCDFFFENESPEHIANKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=938679 LBA42_RS02390 WP_000495896.1 480207..481160(-) (coiA) [Streptococcus pneumoniae strain HAC 39-1996]
ATGTTTGTTGCGAGAGATGCTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGATCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACATAGCCAATAAGGAATCCCTCTATCACTGGTTGAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGCTATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGTCAAAAACTGTGGCTCAAGGAGCGTTTGACTCGTCTACAGCAAGGTTTTCTTTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATCCGGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGACTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCAGCACTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAG

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-263)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	99.369	100	0.994
coiA	Streptococcus pneumoniae Rx1	98.738	100	0.987
coiA	Streptococcus pneumoniae D39	98.738	100	0.987
coiA	Streptococcus pneumoniae R6	98.738	100	0.987
coiA	Streptococcus mitis NCTC 12261	88.644	100	0.886
coiA	Lactococcus lactis subsp. cremoris KW2	41.975	100	0.429