Detailed information NTG0938120

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: V6C49_RS11735
• Genome accession: NZ_CP145241
• Coordinates: 2364765..2365274 (-)
• Length: 169 a.a.
• NCBI ID: WP_002434425.1
• Uniprot ID: -
• Organism: Staphylococcus capitis subsp. capitis strain Sc1365673
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 2359765..2370274

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6C49_RS11690 (V6C49_11675)	-	2360706..2360960 (-)	255	WP_002434433.1	GlsB/YeaQ/YmgE family stress response membrane protein	-
V6C49_RS11695 (V6C49_11680)	-	2361262..2361543 (+)	282	WP_002454427.1	hypothetical protein	-
V6C49_RS11700 (V6C49_11685)	-	2361525..2362274 (-)	750	WP_002454426.1	amidohydrolase	-
V6C49_RS11705 (V6C49_11690)	-	2362431..2362688 (+)	258	WP_002434565.1	helix-turn-helix transcriptional regulator	-
V6C49_RS11710 (V6C49_11695)	-	2362759..2363112 (-)	354	WP_002454425.1	membrane protein	-
V6C49_RS11715 (V6C49_11700)	-	2363196..2363426 (-)	231	WP_002454424.1	hypothetical protein	-
V6C49_RS11720 (V6C49_11705)	-	2363429..2363758 (-)	330	WP_229716971.1	hypothetical protein	-
V6C49_RS11725 (V6C49_11710)	-	2363895..2364149 (-)	255	WP_145405160.1	hypothetical protein	-
V6C49_RS11730 (V6C49_11715)	rpsR	2364476..2364718 (-)	243	WP_001831354.1	30S ribosomal protein S18	-
V6C49_RS11735 (V6C49_11720)	ssbA	2364765..2365274 (-)	510	WP_002434425.1	single-stranded DNA-binding protein	Machinery gene
V6C49_RS11740 (V6C49_11725)	rpsF	2365296..2365592 (-)	297	WP_002434058.1	30S ribosomal protein S6	-
V6C49_RS11745 (V6C49_11730)	-	2365725..2365889 (-)	165	Protein_2263	recombinase family protein	-
V6C49_RS11750 (V6C49_11735)	-	2366005..2366751 (-)	747	WP_145405162.1	HAD family hydrolase	-
V6C49_RS11755 (V6C49_11740)	-	2366755..2367171 (-)	417	WP_229716969.1	NUDIX domain-containing protein	-
V6C49_RS11760 (V6C49_11745)	-	2367168..2367332 (-)	165	WP_367141651.1	hypothetical protein	-
V6C49_RS11765 (V6C49_11750)	-	2367491..2368060 (-)	570	WP_229716965.1	EamA family transporter	-
V6C49_RS11770 (V6C49_11755)	-	2368086..2368451 (-)	366	WP_002454417.1	NUDIX domain-containing protein	-
V6C49_RS11775 (V6C49_11760)	-	2368464..2369141 (-)	678	WP_002434477.1	hypothetical protein	-
V6C49_RS11780 (V6C49_11765)	-	2369145..2370185 (-)	1041	WP_243369148.1	aminotransferase class V-fold PLP-dependent enzyme	-

Sequence

Protein

• Length: 169 a.a.
• Molecular weight: 18688.18 Da
• Isoelectric Point: 4.5778

>NTDB_id=938120 V6C49_RS11735 WP_002434425.1 2364765..2365274(-) (ssbA) [Staphylococcus capitis subsp. capitis strain Sc1365673]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQAENVNNYLSKGSLAGVDGRIQSR
SYENQEGRRIFVTEVVCDSVQFLEPKNSQQGGQRSQNNDFQDYGQGFGGQQSGQNTSYNNNNSSNSNQSDNPFANANGPI
DISDDDLPF

Nucleotide

• Length: 510 bp

>NTDB_id=938120 V6C49_RS11735 WP_002434425.1 2364765..2365274(-) (ssbA) [Staphylococcus capitis subsp. capitis strain Sc1365673]
ATGTTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCAGAATACAGAACCACTCCCTCAGGCGTAAGTGTAGC
GACATTTACTCTAGCAGTTAATCGTACTTTCACGAATGCTCAAGGGGAACGCGAAGCTGATTTCATTAACTGTGTTGTCT
TTAGAAGACAAGCTGAAAATGTTAATAACTACTTATCTAAAGGTAGTTTAGCTGGCGTTGATGGTCGCATACAATCGCGT
AGTTATGAAAATCAAGAAGGTCGTCGTATTTTTGTTACTGAAGTTGTGTGTGATAGTGTTCAATTCCTTGAACCTAAGAA
TTCACAACAAGGTGGCCAACGTTCACAAAACAACGATTTCCAAGACTATGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAATACGTCTTACAATAACAATAATTCATCAAACTCTAATCAATCAGACAACCCATTTGCAAATGCTAATGGCCCAATC
GATATTAGTGATGATGATTTACCATTCTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-103)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	63.483	100	0.669
ssb	Latilactobacillus sakei subsp. sakei 23K	55.172	100	0.568
ssbB	Bacillus subtilis subsp. subtilis str. 168	57.143	66.272	0.379
ssb	Glaesserella parasuis strain SC1401	34.463	100	0.361