Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | LLL8_RS11765 | Genome accession | NZ_AP025700 |
| Coordinates | 2368874..2369374 (-) | Length | 166 a.a. |
| NCBI ID | WP_003131953.1 | Uniprot ID | - |
| Organism | Lactococcus lactis strain L8 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2363874..2374374
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LLL8_RS11740 (LLL8_22930) | gnd | 2364944..2365849 (-) | 906 | WP_038603774.1 | phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating) | - |
| LLL8_RS11745 (LLL8_22940) | - | 2366214..2367062 (+) | 849 | WP_012898662.1 | MurR/RpiR family transcriptional regulator | - |
| LLL8_RS11750 (LLL8_22950) | - | 2367100..2367408 (+) | 309 | WP_010906371.1 | DUF960 domain-containing protein | - |
| LLL8_RS11755 (LLL8_22960) | - | 2367482..2368255 (-) | 774 | WP_003131951.1 | metallophosphoesterase | - |
| LLL8_RS11760 (LLL8_22970) | rpsR | 2368455..2368700 (-) | 246 | WP_003131952.1 | 30S ribosomal protein S18 | - |
| LLL8_RS11765 (LLL8_22980) | ssb | 2368874..2369374 (-) | 501 | WP_003131953.1 | single-stranded DNA-binding protein | Machinery gene |
| LLL8_RS11770 (LLL8_22990) | rpsF | 2369404..2369697 (-) | 294 | WP_003131954.1 | 30S ribosomal protein S6 | - |
| LLL8_RS11775 (LLL8_23000) | - | 2369889..2370743 (-) | 855 | WP_012898664.1 | undecaprenyl-diphosphate phosphatase | - |
| LLL8_RS11780 (LLL8_23010) | - | 2371266..2372732 (+) | 1467 | WP_017865200.1 | amino acid permease | - |
Sequence
Protein
Download Length: 166 a.a. Molecular weight: 18304.13 Da Isoelectric Point: 5.2279
>NTDB_id=93720 LLL8_RS11765 WP_003131953.1 2368874..2369374(-) (ssb) [Lactococcus lactis strain L8]
MINNVVLVGRITRDPELRYTPQNQAVATFSLAVNRQFKNANGEREADFINCVIWRQQAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADSFQMLESRSAREGMGGGTSAGSYSAPSQSTNNTPRPQTNNNNATPNFGRDADPFGSSPMEIS
DDDLPF
MINNVVLVGRITRDPELRYTPQNQAVATFSLAVNRQFKNANGEREADFINCVIWRQQAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADSFQMLESRSAREGMGGGTSAGSYSAPSQSTNNTPRPQTNNNNATPNFGRDADPFGSSPMEIS
DDDLPF
Nucleotide
Download Length: 501 bp
>NTDB_id=93720 LLL8_RS11765 WP_003131953.1 2368874..2369374(-) (ssb) [Lactococcus lactis strain L8]
ATGATTAACAATGTTGTATTAGTAGGACGCATTACTCGCGATCCTGAACTTCGATACACCCCTCAAAATCAAGCTGTCGC
AACATTTTCATTGGCTGTAAACCGTCAATTTAAAAATGCGAATGGCGAACGTGAGGCTGATTTCATTAACTGCGTTATTT
GGCGCCAACAAGCTGAGAATTTGGCGAATTGGGCTAAAAAAGGAGCTTTGATTGGGGTAACTGGTCGAATTCAAACACGT
AACTATGAAAATCAACAAGGTCAACGCGTTTATGTGACTGAGGTTGTGGCTGACAGTTTCCAAATGTTGGAAAGTAGATC
TGCTCGTGAAGGTATGGGAGGCGGAACTTCTGCTGGTTCATATTCTGCACCTAGCCAATCTACAAATAATACTCCACGTC
CACAAACGAATAACAATAATGCAACACCGAATTTCGGTCGTGATGCTGATCCGTTTGGTAGCTCACCGATGGAAATTTCG
GATGATGACCTTCCATTCTAA
ATGATTAACAATGTTGTATTAGTAGGACGCATTACTCGCGATCCTGAACTTCGATACACCCCTCAAAATCAAGCTGTCGC
AACATTTTCATTGGCTGTAAACCGTCAATTTAAAAATGCGAATGGCGAACGTGAGGCTGATTTCATTAACTGCGTTATTT
GGCGCCAACAAGCTGAGAATTTGGCGAATTGGGCTAAAAAAGGAGCTTTGATTGGGGTAACTGGTCGAATTCAAACACGT
AACTATGAAAATCAACAAGGTCAACGCGTTTATGTGACTGAGGTTGTGGCTGACAGTTTCCAAATGTTGGAAAGTAGATC
TGCTCGTGAAGGTATGGGAGGCGGAACTTCTGCTGGTTCATATTCTGCACCTAGCCAATCTACAAATAATACTCCACGTC
CACAAACGAATAACAATAATGCAACACCGAATTTCGGTCGTGATGCTGATCCGTTTGGTAGCTCACCGATGGAAATTTCG
GATGATGACCTTCCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
60.465 |
100 |
0.627 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
57.803 |
100 |
0.602 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
63.855 |
0.373 |
| ssb | Glaesserella parasuis strain SC1401 |
35.028 |
100 |
0.373 |