Detailed information
Bioinformatically predicted
Overview
| Name | pilJ | Type | Machinery gene |
| Locus tag | V5F92_RS03035 | Genome accession | NZ_CP145050 |
| Coordinates | 586439..587383 (+) | Length | 314 a.a. |
| NCBI ID | WP_047916984.1 | Uniprot ID | - |
| Organism | Neisseria gonorrhoeae strain WHO_H_2024 | ||
| Function | type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 581439..592383
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V5F92_RS03010 (V5F92_03010) | - | 581994..582503 (+) | 510 | WP_003687909.1 | isoprenylcysteine carboxyl methyltransferase family protein | - |
| V5F92_RS03015 (V5F92_03015) | - | 582735..583316 (-) | 582 | WP_003690895.1 | superoxide dismutase | - |
| V5F92_RS03020 (V5F92_03020) | dnaB | 583480..584883 (+) | 1404 | WP_012503477.1 | replicative DNA helicase | - |
| V5F92_RS03025 (V5F92_03025) | pilH | 585140..585802 (+) | 663 | WP_047916986.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| V5F92_RS03030 (V5F92_03030) | pilV | 585834..586442 (+) | 609 | WP_003692820.1 | type IV pilus modification protein PilV | Machinery gene |
| V5F92_RS03035 (V5F92_03035) | pilJ | 586439..587383 (+) | 945 | WP_047916984.1 | PilW family protein | Machinery gene |
| V5F92_RS03040 (V5F92_03040) | pilK | 587362..587973 (+) | 612 | WP_003687918.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| V5F92_RS03045 (V5F92_03045) | pilL | 587975..588448 (+) | 474 | WP_195764224.1 | PilX family type IV pilin | Machinery gene |
| V5F92_RS03050 (V5F92_03050) | - | 588518..588826 (-) | 309 | WP_003706588.1 | AzlD family protein | - |
| V5F92_RS03055 (V5F92_03055) | - | 588823..589534 (-) | 712 | Protein_587 | AzlC family ABC transporter permease | - |
| V5F92_RS03060 (V5F92_03060) | dut | 589700..590152 (+) | 453 | WP_003701071.1 | dUTP diphosphatase | - |
| V5F92_RS03065 (V5F92_03065) | dapC | 590224..591411 (+) | 1188 | WP_003701073.1 | succinyldiaminopimelate transaminase | - |
| V5F92_RS03070 (V5F92_03070) | yaaA | 591567..592346 (+) | 780 | WP_003687925.1 | peroxide stress protein YaaA | - |
Sequence
Protein
Download Length: 314 a.a. Molecular weight: 34489.25 Da Isoelectric Point: 8.7147
>NTDB_id=936453 V5F92_RS03035 WP_047916984.1 586439..587383(+) (pilJ) [Neisseria gonorrhoeae strain WHO_H_2024]
MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSVIVLIAVVSSYFTSRKLNDAANERLAIQQDLRNAATLIVRDARMAGSFG
CFNMSEHIEQDVVSDVTQKNPPFSLKRNSTRNSTNKLIPIAESSNIGYQGFIQRLNALIFQYGIDDVNASAATTVVSSCG
AISKPSKQILTLEDAKKELEILNQDKEQNGNIARQRHVVNAYAVGKIAGEEGLFRFQLDDKGKWGNPQLLAKKVKRMDVR
YIYVSGCPEDEDAGKEEQFKYTDKFDSSVTPAGVEVLLDSGSDAKIAASSDNIIYAYRINATIRGGNVCANRTL
MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSVIVLIAVVSSYFTSRKLNDAANERLAIQQDLRNAATLIVRDARMAGSFG
CFNMSEHIEQDVVSDVTQKNPPFSLKRNSTRNSTNKLIPIAESSNIGYQGFIQRLNALIFQYGIDDVNASAATTVVSSCG
AISKPSKQILTLEDAKKELEILNQDKEQNGNIARQRHVVNAYAVGKIAGEEGLFRFQLDDKGKWGNPQLLAKKVKRMDVR
YIYVSGCPEDEDAGKEEQFKYTDKFDSSVTPAGVEVLLDSGSDAKIAASSDNIIYAYRINATIRGGNVCANRTL
Nucleotide
Download Length: 945 bp
>NTDB_id=936453 V5F92_RS03035 WP_047916984.1 586439..587383(+) (pilJ) [Neisseria gonorrhoeae strain WHO_H_2024]
ATGAAACGTAAAATGCTAAACGTACCAAAAGGCGGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
GGGCCTGCTCAGTGTGATTGTCCTGATAGCGGTCGTATCGAGTTACTTTACATCCCGGAAATTAAATGATGCGGCAAACG
AGCGTCTTGCCATTCAACAGGATTTGCGGAATGCGGCAACATTGATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGTTTCAATATGTCCGAGCATATCGAACAGGATGTTGTTTCCGATGTGACGCAAAAAAACCCTCCTTTTTCCTTAAAAAG
GAACAGTACAAGGAACAGTACAAATAAACTTATCCCCATAGCGGAATCTTCAAATATCGGATATCAGGGTTTTATCCAGC
GCCTTAACGCATTGATTTTCCAATACGGAATCGATGATGTTAATGCAAGCGCCGCGACTACCGTCGTCAGCAGCTGTGGC
GCAATATCGAAACCGAGTAAGCAAATCCTTACTTTAGAAGATGCAAAAAAAGAATTGGAGATTCTGAATCAGGATAAGGA
GCAAAATGGCAATATAGCGCGTCAAAGGCATGTGGTCAATGCCTATGCGGTCGGCAAGATTGCCGGTGAGGAAGGTTTGT
TCCGCTTCCAATTGGATGATAAGGGCAAGTGGGGTAATCCTCAGTTGCTCGCGAAAAAGGTTAAACGTATGGATGTGCGG
TATATCTATGTTTCCGGTTGTCCTGAAGATGAAGATGCCGGCAAAGAGGAACAATTCAAATATACGGATAAATTCGACAG
CTCTGTTACGCCTGCCGGGGTGGAGGTTTTATTGGATAGCGGTAGTGATGCCAAGATTGCCGCTTCTTCAGATAATATTA
TTTATGCTTACCGTATCAATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACACTTTGA
ATGAAACGTAAAATGCTAAACGTACCAAAAGGCGGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
GGGCCTGCTCAGTGTGATTGTCCTGATAGCGGTCGTATCGAGTTACTTTACATCCCGGAAATTAAATGATGCGGCAAACG
AGCGTCTTGCCATTCAACAGGATTTGCGGAATGCGGCAACATTGATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGTTTCAATATGTCCGAGCATATCGAACAGGATGTTGTTTCCGATGTGACGCAAAAAAACCCTCCTTTTTCCTTAAAAAG
GAACAGTACAAGGAACAGTACAAATAAACTTATCCCCATAGCGGAATCTTCAAATATCGGATATCAGGGTTTTATCCAGC
GCCTTAACGCATTGATTTTCCAATACGGAATCGATGATGTTAATGCAAGCGCCGCGACTACCGTCGTCAGCAGCTGTGGC
GCAATATCGAAACCGAGTAAGCAAATCCTTACTTTAGAAGATGCAAAAAAAGAATTGGAGATTCTGAATCAGGATAAGGA
GCAAAATGGCAATATAGCGCGTCAAAGGCATGTGGTCAATGCCTATGCGGTCGGCAAGATTGCCGGTGAGGAAGGTTTGT
TCCGCTTCCAATTGGATGATAAGGGCAAGTGGGGTAATCCTCAGTTGCTCGCGAAAAAGGTTAAACGTATGGATGTGCGG
TATATCTATGTTTCCGGTTGTCCTGAAGATGAAGATGCCGGCAAAGAGGAACAATTCAAATATACGGATAAATTCGACAG
CTCTGTTACGCCTGCCGGGGTGGAGGTTTTATTGGATAGCGGTAGTGATGCCAAGATTGCCGCTTCTTCAGATAATATTA
TTTATGCTTACCGTATCAATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACACTTTGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilJ | Neisseria gonorrhoeae MS11 |
91.401 |
100 |
0.914 |