Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ENLAB_RS09245 | Genome accession | NZ_AP025635 |
| Coordinates | 1977299..1977823 (+) | Length | 174 a.a. |
| NCBI ID | WP_005226365.1 | Uniprot ID | A0A505IXH5 |
| Organism | Enterococcus innesii strain DB-1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1972299..1982823
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ENLAB_RS09235 (ENLAB_18360) | gyrA | 1974182..1976692 (+) | 2511 | WP_244350792.1 | DNA gyrase subunit A | - |
| ENLAB_RS09240 (ENLAB_18370) | rpsF | 1976956..1977255 (+) | 300 | WP_005226363.1 | 30S ribosomal protein S6 | - |
| ENLAB_RS09245 (ENLAB_18380) | ssb | 1977299..1977823 (+) | 525 | WP_005226365.1 | single-stranded DNA-binding protein | Machinery gene |
| ENLAB_RS09250 (ENLAB_18390) | rpsR | 1977847..1978083 (+) | 237 | WP_005226367.1 | 30S ribosomal protein S18 | - |
| ENLAB_RS09255 (ENLAB_18400) | - | 1978323..1979771 (+) | 1449 | WP_244350793.1 | DHH family phosphoesterase | - |
| ENLAB_RS09260 (ENLAB_18410) | rplI | 1979787..1980239 (+) | 453 | WP_005226371.1 | 50S ribosomal protein L9 | - |
| ENLAB_RS09265 (ENLAB_18420) | dnaB | 1980348..1981718 (+) | 1371 | WP_005226374.1 | replicative DNA helicase | - |
Sequence
Protein
Download Length: 174 a.a. Molecular weight: 19149.65 Da Isoelectric Point: 4.7093
>NTDB_id=93352 ENLAB_RS09245 WP_005226365.1 1977299..1977823(+) (ssb) [Enterococcus innesii strain DB-1]
MINNVVLVGRLTKDPDLRYTSNGTGVATFTLAVNRNFTNQSGEREADFINCVIWRKPAETLANYARKGTLLGVTGRIQTR
SYDNQQGQRVYVTEVVADNFQLLESRNASEQRRTTDSGSGSNNTYNSNSSSGFGNNNSNQTQSSQPSGMPNFDRDNSDPF
GNSSIDISDDDLPF
MINNVVLVGRLTKDPDLRYTSNGTGVATFTLAVNRNFTNQSGEREADFINCVIWRKPAETLANYARKGTLLGVTGRIQTR
SYDNQQGQRVYVTEVVADNFQLLESRNASEQRRTTDSGSGSNNTYNSNSSSGFGNNNSNQTQSSQPSGMPNFDRDNSDPF
GNSSIDISDDDLPF
Nucleotide
Download Length: 525 bp
>NTDB_id=93352 ENLAB_RS09245 WP_005226365.1 1977299..1977823(+) (ssb) [Enterococcus innesii strain DB-1]
TTGATTAATAATGTTGTACTAGTAGGAAGACTAACCAAAGATCCTGATTTACGTTACACTTCTAATGGCACTGGTGTCGC
AACCTTTACCTTGGCGGTAAACCGCAATTTTACCAACCAAAGTGGAGAGCGCGAAGCTGATTTCATCAACTGTGTTATTT
GGAGAAAACCAGCGGAAACATTAGCAAACTATGCACGCAAAGGAACTTTATTAGGAGTTACTGGACGTATTCAAACCCGT
TCATACGACAACCAACAAGGCCAACGTGTTTATGTAACAGAAGTCGTTGCTGACAACTTCCAATTATTAGAGTCGCGGAA
TGCTTCCGAGCAAAGACGCACAACTGATAGCGGATCTGGCAGTAACAATACGTATAACTCAAACAGTTCTTCTGGATTTG
GTAACAATAACTCAAATCAAACTCAATCCTCTCAACCATCAGGAATGCCTAATTTTGATCGAGACAACTCCGATCCATTC
GGAAACTCATCAATCGACATTTCAGACGATGATTTACCATTCTAA
TTGATTAATAATGTTGTACTAGTAGGAAGACTAACCAAAGATCCTGATTTACGTTACACTTCTAATGGCACTGGTGTCGC
AACCTTTACCTTGGCGGTAAACCGCAATTTTACCAACCAAAGTGGAGAGCGCGAAGCTGATTTCATCAACTGTGTTATTT
GGAGAAAACCAGCGGAAACATTAGCAAACTATGCACGCAAAGGAACTTTATTAGGAGTTACTGGACGTATTCAAACCCGT
TCATACGACAACCAACAAGGCCAACGTGTTTATGTAACAGAAGTCGTTGCTGACAACTTCCAATTATTAGAGTCGCGGAA
TGCTTCCGAGCAAAGACGCACAACTGATAGCGGATCTGGCAGTAACAATACGTATAACTCAAACAGTTCTTCTGGATTTG
GTAACAATAACTCAAATCAAACTCAATCCTCTCAACCATCAGGAATGCCTAATTTTGATCGAGACAACTCCGATCCATTC
GGAAACTCATCAATCGACATTTCAGACGATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
60.795 |
100 |
0.615 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.866 |
100 |
0.575 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
63.208 |
60.92 |
0.385 |