Detailed information NTG0932758

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: V3O02_RS15070
• Genome accession: NZ_CP144238
• Coordinates: 3100976..3102094 (+)
• Length: 372 a.a.
• NCBI ID: WP_000347039.1
• Uniprot ID: A0A9P2XLL8
• Organism: Acinetobacter baumannii strain SRM21
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3095976..3107094

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V3O02_RS15060 (V3O02_15060)	-	3099092..3099784 (-)	693	WP_001108512.1	YggS family pyridoxal phosphate-dependent enzyme	-
V3O02_RS15065 (V3O02_15065)	pilT	3099911..3100948 (+)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
V3O02_RS15070 (V3O02_15070)	pilU	3100976..3102094 (+)	1119	WP_000347039.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
V3O02_RS15075 (V3O02_15075)	fur	3102164..3102601 (-)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
V3O02_RS15080 (V3O02_15080)	bamE	3102713..3103111 (+)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
V3O02_RS15085 (V3O02_15085)	-	3103166..3103489 (-)	324	WP_000442587.1	RnfH family protein	-
V3O02_RS15090 (V3O02_15090)	-	3103489..3104556 (-)	1068	WP_002019572.1	hypothetical protein	-
V3O02_RS15095 (V3O02_15095)	-	3104709..3105164 (-)	456	WP_000782976.1	bacteriohemerythrin	-
V3O02_RS15100 (V3O02_15100)	-	3105417..3106265 (-)	849	WP_000336548.1	class II glutamine amidotransferase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41933.13 Da
• Isoelectric Point: 6.6944

>NTDB_id=932758 V3O02_RS15070 WP_000347039.1 3100976..3102094(+) (pilU) [Acinetobacter baumannii strain SRM21]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRREFAETRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=932758 V3O02_RS15070 WP_000347039.1 3100976..3102094(+) (pilU) [Acinetobacter baumannii strain SRM21]
ATGGATTTTAATGACTTGCTCAACCTGATGGTTGAAAAAAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAACGGGCAAATTGTTCCAATTTCAAAAAACAGTCTTTCTGGGGAAGTGATTGGTCAACTGTTACATTCCA
TCATGAGTGAAAAACAACGCAGAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTTGTAGGCGCGACAG
GCACAGGTAAATCTACTTCACTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCTAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCAGATGAAGGTCCTGATCAATTATCAGACGGGAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (31-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.926	100	0.772
pilU	Pseudomonas stutzeri DSM 10701	69.565	98.925	0.688
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.486	93.011	0.395