Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | MWM05_RS11040 | Genome accession | NZ_AP025593 |
| Coordinates | 2039724..2040032 (+) | Length | 102 a.a. |
| NCBI ID | WP_244362724.1 | Uniprot ID | - |
| Organism | Thermus brockianus strain SNM4-1 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2034724..2045032
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MWM05_RS11005 (TbrSNM41_21700) | - | 2035122..2035595 (+) | 474 | WP_071677026.1 | hypothetical protein | - |
| MWM05_RS11010 (TbrSNM41_21710) | pfkA | 2035563..2036531 (-) | 969 | WP_244362716.1 | 6-phosphofructokinase | - |
| MWM05_RS11015 (TbrSNM41_21720) | rsmI | 2036528..2037325 (-) | 798 | WP_244362718.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| MWM05_RS11020 (TbrSNM41_21730) | - | 2037327..2037821 (-) | 495 | WP_071677023.1 | TFIIB-type zinc ribbon-containing protein | - |
| MWM05_RS11025 (TbrSNM41_21740) | - | 2037896..2038423 (-) | 528 | WP_071677022.1 | inorganic diphosphatase | - |
| MWM05_RS11030 (TbrSNM41_21750) | - | 2038434..2039063 (-) | 630 | WP_244362720.1 | glycerophosphodiester phosphodiesterase | - |
| MWM05_RS11035 (TbrSNM41_21760) | - | 2039086..2039751 (+) | 666 | WP_244362722.1 | YcxB family protein | - |
| MWM05_RS11040 (TbrSNM41_21770) | comEA | 2039724..2040032 (+) | 309 | WP_244362724.1 | ComEA family DNA-binding protein | Machinery gene |
| MWM05_RS11045 (TbrSNM41_21780) | comA/comEC | 2040019..2042052 (+) | 2034 | WP_244362726.1 | DNA internalization-related competence protein ComEC/Rec2 | Machinery gene |
| MWM05_RS11050 (TbrSNM41_21790) | - | 2042040..2042846 (-) | 807 | WP_244362728.1 | ParB/RepB/Spo0J family partition protein | - |
| MWM05_RS11055 (TbrSNM41_21800) | soj | 2042830..2043579 (-) | 750 | WP_071677018.1 | chromosome-partitioning ATPase Soj | - |
| MWM05_RS11060 (TbrSNM41_21810) | rsmG | 2043573..2044298 (-) | 726 | WP_244362730.1 | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | - |
Sequence
Protein
Download Length: 102 a.a. Molecular weight: 11075.17 Da Isoelectric Point: 9.5046
>NTDB_id=92945 MWM05_RS11040 WP_244362724.1 2039724..2040032(+) (comEA) [Thermus brockianus strain SNM4-1]
MVLGYLLAVALLVLLSLWPKVAPSPQAVRVETYVQAAFTPPPPEPVSLNQASLEALEALPGVGPVLARRILEGRPYERVE
DLLKVKGIGPATLEKLRPYVRP
MVLGYLLAVALLVLLSLWPKVAPSPQAVRVETYVQAAFTPPPPEPVSLNQASLEALEALPGVGPVLARRILEGRPYERVE
DLLKVKGIGPATLEKLRPYVRP
Nucleotide
Download Length: 309 bp
>NTDB_id=92945 MWM05_RS11040 WP_244362724.1 2039724..2040032(+) (comEA) [Thermus brockianus strain SNM4-1]
GTGGTTCTTGGCTACCTCCTGGCGGTAGCCCTCTTGGTCCTCCTCAGCCTCTGGCCCAAGGTGGCCCCAAGCCCCCAGGC
AGTGCGGGTGGAAACCTATGTCCAGGCCGCCTTCACCCCGCCACCGCCTGAGCCGGTGAGCCTGAACCAGGCGAGCCTCG
AGGCGCTGGAGGCCCTCCCCGGCGTGGGCCCGGTCCTGGCCCGGCGCATTCTGGAGGGGAGGCCGTACGAGCGGGTGGAA
GACCTTCTCAAGGTAAAGGGCATCGGCCCTGCCACCCTAGAGAAGCTCCGGCCGTATGTCCGCCCCTAG
GTGGTTCTTGGCTACCTCCTGGCGGTAGCCCTCTTGGTCCTCCTCAGCCTCTGGCCCAAGGTGGCCCCAAGCCCCCAGGC
AGTGCGGGTGGAAACCTATGTCCAGGCCGCCTTCACCCCGCCACCGCCTGAGCCGGTGAGCCTGAACCAGGCGAGCCTCG
AGGCGCTGGAGGCCCTCCCCGGCGTGGGCCCGGTCCTGGCCCGGCGCATTCTGGAGGGGAGGCCGTACGAGCGGGTGGAA
GACCTTCTCAAGGTAAAGGGCATCGGCCCTGCCACCCTAGAGAAGCTCCGGCCGTATGTCCGCCCCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Thermus thermophilus HB27 |
75.49 |
100 |
0.755 |
| comEA | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
51.389 |
70.588 |
0.363 |
| comA | Synechocystis sp. PCC 6803 |
40.659 |
89.216 |
0.363 |