Detailed information NTG0092944

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: MWM05_RS10630
• Genome accession: NZ_AP025593
• Coordinates: 1965741..1968017 (+)
• Length: 758 a.a.
• NCBI ID: WP_244362608.1
• Uniprot ID: -
• Organism: Thermus brockianus strain SNM4-1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1960741..1973017

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MWM05_RS10605 (TbrSNM41_20920)	-	1961253..1962257 (+)	1005	WP_071677090.1	homoisocitrate dehydrogenase	-
MWM05_RS10610 (TbrSNM41_20930)	pilM	1962450..1963583 (+)	1134	WP_244362604.1	type IV pilus assembly protein PilM	Machinery gene
MWM05_RS10615 (TbrSNM41_20940)	pilN	1963576..1964199 (+)	624	WP_071677088.1	flagellar protein FliT	Machinery gene
MWM05_RS10620 (TbrSNM41_20950)	pilO	1964189..1964788 (+)	600	WP_071677935.1	type 4a pilus biogenesis protein PilO	Machinery gene
MWM05_RS10625 (TbrSNM41_20960)	pilW	1964785..1965729 (+)	945	WP_244362606.1	competence protein	Machinery gene
MWM05_RS10630 (TbrSNM41_20970)	pilQ	1965741..1968017 (+)	2277	WP_244362608.1	secretin N-terminal domain-containing protein	Machinery gene
MWM05_RS10635 (TbrSNM41_20980)	aroC	1968071..1969222 (+)	1152	WP_244362610.1	chorismate synthase	-
MWM05_RS10640 (TbrSNM41_20990)	-	1969239..1969793 (+)	555	WP_244362612.1	shikimate kinase	-
MWM05_RS10645 (TbrSNM41_21000)	-	1969771..1970817 (+)	1047	WP_244362614.1	3-dehydroquinate synthase	-
MWM05_RS10650 (TbrSNM41_21010)	rsmF	1970806..1972173 (-)	1368	WP_244362616.1	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	-
MWM05_RS10655 (TbrSNM41_21020)	-	1972227..1972604 (+)	378	WP_071677081.1	4'-phosphopantetheinyl transferase superfamily protein	-
MWM05_RS10660 (TbrSNM41_21030)	-	1972582..1972947 (-)	366	WP_071677080.1	DUF4870 domain-containing protein	-

Sequence

Protein

• Length: 758 a.a.
• Molecular weight: 82658.84 Da
• Isoelectric Point: 6.0319

>NTDB_id=92944 MWM05_RS10630 WP_244362608.1 1965741..1968017(+) (pilQ) [Thermus brockianus strain SNM4-1]
MKPLVWVLIWALGSLSLFALAGSLPDEPRFAARVDLKVSESQVRAGATLPLDVVLEALAKSVGLQPLIYRAYDASGDPAK
AQPPLPNVKLDFQGKPFREVWDLLFATYGAQFNLDYLFLPPDVVVVAPTQVITALVDAPSRAGAAERRPYVVGIPEAAYR
QAIQSQGGQVQVVSNVESAKAWVQNDLLPFLSREAAGLNVNWIVVEEGGRLKAILSVLATPEQHARFSDILQRAGIDFRP
LPALAQPKPRLERAYALTHTTFPELLAFLQAQVPGAQISVVPTDPKKALVLATEEDHARLAELLKAADVPKPPAKVRRVY
ALQNLTFLEAQERLKPLLEKEIPTARLESIPSNPKALLLEAAEADQALFAELLKAVDVPPQAPAPTQEATQRRLYPLRFA
DAEKVAPFLAREVPGIVVQTVPGQPVLSVRGTERQLAEAETLLAQIDRAPEQGPPLFQRAYQLSNAKASELAKVLQEALQ
AQSQAQGQGQGQTPTRRPATVVADERTNTLIVTGTQEDLALVEGLIPRLDQSVPQVNLRVRIQEVQSNLSRSLGIRWNTI
SGGNVVASILSSGLSLIFDSTRSLASLNIIATLDALQKQGLSRALRDVNQLVLNNQTARLQSGETFFIRRVVNDREERVP
FDIGIIVEATPQITADGQILLNIKAEVSGNVQRNPVNGDVDRFTKQVVTTTLRVRDGQTVVLGGLTSQETNQTQQGVPFL
MDIPLIGELFKQRSQDTTEKELLVVITANIVRETANRP

Nucleotide

• Length: 2277 bp

>NTDB_id=92944 MWM05_RS10630 WP_244362608.1 1965741..1968017(+) (pilQ) [Thermus brockianus strain SNM4-1]
ATGAAGCCCTTGGTTTGGGTCTTGATTTGGGCCTTGGGAAGCTTGAGCCTTTTTGCCCTGGCGGGGAGCCTTCCGGACGA
GCCCCGCTTCGCCGCCAGGGTGGACCTAAAGGTTTCGGAGAGCCAGGTGCGGGCCGGGGCCACCTTGCCCCTGGACGTGG
TCCTGGAAGCCCTGGCCAAAAGCGTGGGCCTCCAGCCCCTCATCTACCGGGCCTACGACGCCTCGGGGGACCCGGCCAAG
GCCCAGCCCCCCTTGCCCAACGTGAAACTGGACTTCCAGGGCAAGCCCTTCCGGGAGGTGTGGGACCTCCTCTTCGCCAC
CTACGGGGCCCAGTTCAACCTGGACTACCTCTTCCTGCCCCCGGACGTGGTGGTGGTGGCCCCCACCCAGGTGATCACCG
CCTTGGTGGACGCCCCAAGCCGCGCCGGGGCGGCGGAGCGCAGGCCTTATGTGGTGGGGATTCCCGAGGCTGCCTATCGC
CAAGCCATCCAAAGCCAGGGGGGACAAGTCCAGGTGGTGTCCAATGTGGAATCCGCCAAAGCCTGGGTCCAAAACGACCT
CCTCCCCTTCCTCTCCCGGGAGGCCGCCGGGCTCAACGTGAACTGGATCGTGGTGGAGGAGGGCGGGCGTCTCAAGGCCA
TCCTCTCCGTCCTGGCCACCCCCGAGCAACACGCCCGCTTCTCCGATATCCTCCAACGGGCGGGGATTGACTTCCGGCCC
CTTCCCGCCCTGGCCCAGCCCAAGCCCCGCCTAGAGCGGGCCTACGCCCTAACCCACACTACCTTCCCCGAGCTCCTCGC
CTTCCTCCAGGCCCAGGTGCCCGGGGCCCAGATCAGCGTGGTGCCCACGGACCCCAAAAAGGCCCTTGTCCTGGCCACGG
AGGAGGACCACGCCCGCCTGGCCGAGCTCCTCAAGGCCGCCGATGTCCCCAAACCCCCGGCCAAGGTGCGCCGGGTCTAC
GCCCTACAAAACCTCACCTTCCTCGAGGCCCAGGAGCGCCTAAAGCCCCTTCTGGAAAAGGAAATTCCCACGGCCCGCCT
GGAAAGCATCCCCAGCAACCCCAAAGCCCTACTCCTGGAGGCCGCCGAGGCCGACCAGGCCCTCTTCGCCGAGCTCCTAA
AGGCGGTGGACGTGCCCCCGCAGGCCCCCGCCCCCACCCAGGAGGCCACGCAAAGGCGCCTTTACCCCTTGCGCTTCGCC
GACGCCGAGAAAGTGGCCCCCTTCCTGGCCCGGGAGGTGCCAGGCATCGTGGTGCAGACCGTTCCGGGGCAACCCGTCCT
CTCCGTGCGGGGCACGGAGAGGCAACTGGCCGAGGCGGAAACCCTCCTCGCCCAGATTGACCGGGCCCCCGAGCAGGGCC
CTCCCCTCTTCCAACGGGCTTACCAGCTCTCCAACGCCAAGGCCAGTGAGCTCGCCAAGGTCCTCCAAGAGGCCCTCCAG
GCCCAAAGCCAGGCCCAGGGCCAGGGGCAGGGGCAAACCCCCACCCGGCGCCCGGCCACGGTGGTGGCGGACGAGCGCAC
CAACACCCTCATCGTCACCGGGACCCAGGAGGATCTGGCCCTAGTGGAGGGGCTCATCCCCCGGCTGGACCAGTCGGTGC
CCCAGGTGAACCTGAGGGTGCGCATCCAAGAGGTGCAGTCCAACCTGAGCCGTAGCCTGGGAATCCGATGGAACACCATC
TCCGGCGGCAACGTGGTAGCGAGCATCCTGAGCTCTGGCCTGTCGTTGATCTTTGACAGCACCCGCAGCCTCGCCAGCCT
GAACATCATAGCGACCCTAGATGCTCTACAAAAACAAGGCCTGTCCCGTGCCCTCAGGGATGTAAACCAGCTCGTGTTGA
ACAACCAAACGGCACGGTTGCAATCGGGCGAAACCTTCTTCATCCGCCGTGTGGTGAACGATCGGGAGGAACGGGTTCCC
TTTGACATCGGCATCATCGTGGAGGCCACTCCCCAGATCACCGCCGACGGGCAGATTCTCCTGAACATCAAGGCCGAGGT
TTCCGGCAACGTCCAGCGCAACCCCGTGAACGGGGATGTGGACCGGTTTACCAAGCAGGTGGTGACCACCACCCTGCGGG
TGCGGGACGGGCAGACCGTGGTCCTAGGGGGGCTTACCTCCCAGGAAACCAACCAGACGCAACAGGGTGTGCCCTTCCTC
ATGGATATTCCCCTTATCGGCGAACTCTTCAAACAGCGTAGCCAGGACACCACGGAGAAGGAACTCCTGGTGGTCATAAC
CGCCAATATCGTAAGGGAGACCGCCAACCGTCCCTAA

Domains

Predicted by InterproScan.

• Bacterial type II and III secretion system protein (Secretin) (595-752)

• Bacterial type II/III secretion system short domain (Secretin_N) (459-535)

• Bacterial type II/III secretion system short domain (Secretin_N) (393-452)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Thermus thermophilus HB27	80.876	99.34	0.803