Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | MWM05_RS10620 | Genome accession | NZ_AP025593 |
| Coordinates | 1964189..1964788 (+) | Length | 199 a.a. |
| NCBI ID | WP_071677935.1 | Uniprot ID | A0A1J0LT18 |
| Organism | Thermus brockianus strain SNM4-1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1959189..1969788
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MWM05_RS10595 (TbrSNM41_20900) | - | 1959265..1960638 (+) | 1374 | WP_420833573.1 | HD-GYP domain-containing protein | - |
| MWM05_RS10600 (TbrSNM41_20910) | - | 1960674..1961183 (+) | 510 | WP_071677091.1 | DUF5317 domain-containing protein | - |
| MWM05_RS10605 (TbrSNM41_20920) | - | 1961253..1962257 (+) | 1005 | WP_071677090.1 | homoisocitrate dehydrogenase | - |
| MWM05_RS10610 (TbrSNM41_20930) | pilM | 1962450..1963583 (+) | 1134 | WP_244362604.1 | type IV pilus assembly protein PilM | Machinery gene |
| MWM05_RS10615 (TbrSNM41_20940) | pilN | 1963576..1964199 (+) | 624 | WP_071677088.1 | flagellar protein FliT | Machinery gene |
| MWM05_RS10620 (TbrSNM41_20950) | pilO | 1964189..1964788 (+) | 600 | WP_071677935.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| MWM05_RS10625 (TbrSNM41_20960) | pilW | 1964785..1965729 (+) | 945 | WP_244362606.1 | competence protein | Machinery gene |
| MWM05_RS10630 (TbrSNM41_20970) | pilQ | 1965741..1968017 (+) | 2277 | WP_244362608.1 | secretin N-terminal domain-containing protein | Machinery gene |
| MWM05_RS10635 (TbrSNM41_20980) | aroC | 1968071..1969222 (+) | 1152 | WP_244362610.1 | chorismate synthase | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22041.48 Da Isoelectric Point: 9.5792
>NTDB_id=92942 MWM05_RS10620 WP_071677935.1 1964189..1964788(+) (pilO) [Thermus brockianus strain SNM4-1]
MLARLGQREWALIAIALTVVVALLWYFLLIVPLRQETETVRQEIQTLIPERDRGRQAQRALPELRAAIAALQAERQAFLR
ALPREERLAQVLNEILGEALRSGVTVRSFTRSPTSAPVPEVRAVNLALSLEAPFPETYAYLKRLEGLSRFSSLSGINLSV
QGQDLNPILSTSLTLTLYMLARDLETGAPSGQPTQGGER
MLARLGQREWALIAIALTVVVALLWYFLLIVPLRQETETVRQEIQTLIPERDRGRQAQRALPELRAAIAALQAERQAFLR
ALPREERLAQVLNEILGEALRSGVTVRSFTRSPTSAPVPEVRAVNLALSLEAPFPETYAYLKRLEGLSRFSSLSGINLSV
QGQDLNPILSTSLTLTLYMLARDLETGAPSGQPTQGGER
Nucleotide
Download Length: 600 bp
>NTDB_id=92942 MWM05_RS10620 WP_071677935.1 1964189..1964788(+) (pilO) [Thermus brockianus strain SNM4-1]
GTGCTCGCTAGGCTGGGACAACGGGAATGGGCCCTCATCGCCATCGCCCTTACGGTGGTGGTGGCCCTCCTTTGGTACTT
CCTCCTCATCGTCCCCCTACGGCAGGAAACGGAAACGGTGCGCCAGGAGATCCAGACCCTAATCCCCGAGCGGGACCGGG
GGCGCCAGGCCCAAAGGGCCCTCCCGGAACTCCGGGCGGCCATCGCGGCGCTCCAGGCCGAACGCCAGGCCTTCCTAAGG
GCGCTTCCCCGGGAGGAACGGCTCGCCCAGGTGCTGAACGAGATCCTAGGCGAAGCCCTCCGGAGCGGGGTAACGGTGCG
CTCCTTCACCCGCTCCCCCACCTCGGCCCCCGTGCCCGAGGTGCGGGCGGTGAACCTAGCCCTGTCCCTCGAGGCACCCT
TCCCCGAAACCTACGCCTACCTAAAGCGCCTAGAAGGCCTTTCCCGCTTTAGCTCCCTCTCCGGGATTAACCTGAGCGTC
CAGGGCCAGGACCTAAACCCCATCCTGAGCACGAGCCTCACCCTGACCCTGTACATGCTGGCCAGGGACCTAGAGACGGG
CGCGCCCTCGGGCCAGCCAACCCAAGGAGGTGAGCGGTGA
GTGCTCGCTAGGCTGGGACAACGGGAATGGGCCCTCATCGCCATCGCCCTTACGGTGGTGGTGGCCCTCCTTTGGTACTT
CCTCCTCATCGTCCCCCTACGGCAGGAAACGGAAACGGTGCGCCAGGAGATCCAGACCCTAATCCCCGAGCGGGACCGGG
GGCGCCAGGCCCAAAGGGCCCTCCCGGAACTCCGGGCGGCCATCGCGGCGCTCCAGGCCGAACGCCAGGCCTTCCTAAGG
GCGCTTCCCCGGGAGGAACGGCTCGCCCAGGTGCTGAACGAGATCCTAGGCGAAGCCCTCCGGAGCGGGGTAACGGTGCG
CTCCTTCACCCGCTCCCCCACCTCGGCCCCCGTGCCCGAGGTGCGGGCGGTGAACCTAGCCCTGTCCCTCGAGGCACCCT
TCCCCGAAACCTACGCCTACCTAAAGCGCCTAGAAGGCCTTTCCCGCTTTAGCTCCCTCTCCGGGATTAACCTGAGCGTC
CAGGGCCAGGACCTAAACCCCATCCTGAGCACGAGCCTCACCCTGACCCTGTACATGCTGGCCAGGGACCTAGAGACGGG
CGCGCCCTCGGGCCAGCCAACCCAAGGAGGTGAGCGGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Thermus thermophilus HB27 |
73.057 |
96.985 |
0.709 |