Detailed information NTG0928547

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: VZM76_RS01890
• Genome accession: NZ_CP143292
• Coordinates: 402857..405007 (+)
• Length: 716 a.a.
• NCBI ID: WP_063721087.1
• Uniprot ID: -
• Organism: Lactiplantibacillus plantarum strain CGMCC 15358
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 397857..410007

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VZM76_RS01860 (VZM76_01860)	-	398293..399465 (+)	1173	WP_226319713.1	sensor histidine kinase	-
VZM76_RS01865 (VZM76_01865)	-	399466..400209 (+)	744	WP_220675340.1	response regulator transcription factor	-
VZM76_RS01870 (VZM76_01870)	-	400328..401071 (+)	744	WP_173819220.1	response regulator transcription factor	-
VZM76_RS01875 (VZM76_01875)	-	401365..402138 (-)	774	WP_003646470.1	CPBP family intramembrane glutamic endopeptidase	-
VZM76_RS01880 (VZM76_01880)	plnF	402237..402395 (-)	159	WP_003643811.1	two-peptide bacteriocin plantaricin EF subunit PlnF	-
VZM76_RS01885 (VZM76_01885)	plnE	402420..402590 (-)	171	WP_003641985.1	two-peptide bacteriocin plantaricin EF subunit PlnE	-
VZM76_RS01890 (VZM76_01890)	comA	402857..405007 (+)	2151	WP_063721087.1	peptide cleavage/export ABC transporter	Regulator
VZM76_RS01895 (VZM76_01895)	-	405023..406399 (+)	1377	WP_065080253.1	HlyD family secretion protein	-
VZM76_RS01900 (VZM76_01900)	-	406489..407178 (+)	690	WP_062688864.1	CPBP family intramembrane glutamic endopeptidase	-
VZM76_RS01905 (VZM76_01905)	-	407245..407823 (+)	579	WP_324715185.1	CPBP family intramembrane glutamic endopeptidase	-
VZM76_RS01910 (VZM76_01910)	-	407999..408679 (+)	681	WP_053566440.1	CPBP family intramembrane glutamic endopeptidase	-
VZM76_RS01915 (VZM76_01915)	-	408773..409459 (+)	687	WP_053566441.1	CPBP family intramembrane glutamic endopeptidase	-
VZM76_RS01920 (VZM76_01920)	-	409597..409800 (+)	204	WP_060684281.1	hypothetical protein	-

Sequence

Protein

• Length: 716 a.a.
• Molecular weight: 79937.65 Da
• Isoelectric Point: 6.7528

>NTDB_id=928547 VZM76_RS01890 WP_063721087.1 402857..405007(+) (comA) [Lactiplantibacillus plantarum strain CGMCC 15358]
MHWRNYVAQVDEMDCGVAALAMILKNYGSTTSLAYLRNIAKTSLEGTTALGLVKTAEKLGFETKAIQADMSLFDVQDLPL
PFIVHVTKNGNLQHFYVVVKTSKTHVVIADPDPTVAVISMSKERFESEWSGVALFFAPKSEYKPVKQDKGSLWGFIPSLL
KQRRLVINIVLAAVLITIISICGSYFLQAVIDTYIPNNMHSTLAVVAIGLIVFYTFQAIFTYAQNFLLAVLGQRLSIEII
LGYIRHVFELPMSFFATRRTGEIVSRFTDASKIIDALASTIVSLFLDVSIVIIMGAILVIQNMTLFWITLLSLPIYAVVI
LAFNKSFERLNQKEMESNAILSSAIIEDLHGIETVKALNGETERYQKIDSEFVDYLRKSLAYLKADTLQQALKLFIQLVL
EVVVLWVGANLVIHNQLSVGELMTYNALLAYFVNPLQNIINLQTKLQSAKVANNRLNEVYLVASEFEASRPIHNESQLNG
DIKLQGVSYRYGYGENVLDDVNLTIRQHDKVAIVGMSGSGKSTLVKLLIDFYQPNSGDVILNGFNVKNIDKHTLRTHINY
IPQEPYIFSATIEENLRLGNRSGITEKDIAKACQLALIDTDINKMAMQYQTKLDENGNTLSGGQRQRLTIARALLSPAQV
LIFDESTSGLDAITEKQLIDNLVAMTDKTIIFIAHRLSIAKRTNHIIVLHDGRVAEEGTHAALLNEHGYYYDLINS

Nucleotide

• Length: 2151 bp

>NTDB_id=928547 VZM76_RS01890 WP_063721087.1 402857..405007(+) (comA) [Lactiplantibacillus plantarum strain CGMCC 15358]
ATGCATTGGAGAAACTATGTTGCGCAAGTTGACGAGATGGACTGTGGGGTCGCAGCTTTAGCAATGATTTTGAAAAATTA
TGGTTCAACAACATCATTGGCCTATCTAAGAAATATTGCTAAAACGAGTTTAGAAGGGACTACGGCATTAGGATTAGTAA
AAACGGCCGAAAAGTTAGGTTTTGAAACCAAAGCAATTCAAGCAGATATGAGTCTTTTCGATGTACAAGATTTACCATTG
CCATTCATTGTGCATGTTACCAAAAATGGGAATCTACAGCATTTTTATGTCGTTGTAAAAACCTCGAAAACGCATGTCGT
GATTGCTGATCCGGACCCAACAGTTGCGGTTATCAGTATGTCAAAGGAACGGTTTGAAAGCGAATGGTCCGGAGTTGCCC
TTTTCTTTGCACCGAAGTCGGAATATAAGCCAGTTAAGCAAGATAAGGGCTCACTATGGGGATTTATTCCAAGCTTATTA
AAGCAGCGCCGACTGGTTATTAATATTGTGCTTGCTGCAGTTTTAATCACGATTATTAGTATCTGTGGGTCTTATTTCTT
ACAAGCGGTGATTGATACTTATATTCCCAATAATATGCACAGTACATTGGCAGTGGTGGCCATTGGTCTAATCGTTTTTT
ATACCTTTCAGGCTATCTTTACTTATGCCCAGAATTTTTTATTGGCGGTTTTAGGTCAACGACTTTCGATTGAAATTATT
TTAGGCTATATTCGGCACGTCTTTGAATTGCCAATGAGTTTTTTTGCCACTCGGCGGACGGGGGAAATTGTTTCGAGGTT
TACGGATGCCAGTAAGATTATTGATGCGTTAGCTAGCACAATTGTTTCGCTGTTTTTAGATGTCAGCATCGTTATTATTA
TGGGGGCAATCTTGGTAATCCAGAATATGACACTTTTTTGGATTACGTTACTCTCGTTGCCAATCTACGCGGTTGTCATC
TTAGCCTTTAATAAATCCTTTGAACGATTGAATCAAAAGGAAATGGAGAGCAATGCTATTTTGAGTTCAGCCATTATTGA
GGATCTTCATGGGATTGAAACTGTTAAGGCGCTGAATGGTGAGACGGAACGTTATCAGAAAATTGATTCAGAATTTGTTG
ATTATCTACGTAAGAGTTTGGCCTATCTTAAAGCGGATACTTTGCAACAGGCATTAAAACTGTTTATACAGTTAGTCTTA
GAAGTTGTTGTTCTATGGGTGGGCGCCAATCTCGTCATTCATAATCAGTTATCAGTTGGGGAGCTCATGACATATAATGC
TTTATTAGCCTATTTTGTTAATCCACTACAGAATATTATTAATTTGCAGACTAAGCTTCAAAGCGCTAAGGTCGCTAACA
ACCGGTTAAATGAAGTGTATTTGGTCGCTAGTGAATTTGAGGCGTCACGGCCAATTCATAATGAAAGTCAATTAAATGGT
GATATTAAGTTACAAGGGGTCAGCTATCGTTATGGTTACGGTGAAAATGTCTTAGATGATGTTAATTTGACGATTCGACA
ACATGATAAGGTTGCAATTGTGGGGATGAGTGGCTCTGGCAAGTCCACGTTAGTTAAATTGCTTATTGATTTTTATCAAC
CAAATAGTGGTGATGTCATATTGAACGGCTTCAACGTTAAGAACATCGATAAGCATACATTGCGGACCCATATTAACTAC
ATCCCGCAGGAACCATACATCTTTTCAGCGACCATTGAAGAAAATTTAAGATTAGGTAATCGCAGCGGTATTACTGAGAA
AGATATTGCGAAGGCTTGCCAATTGGCGTTAATTGATACGGATATTAATAAAATGGCCATGCAATACCAAACTAAGCTAG
ATGAGAATGGTAATACACTATCAGGTGGTCAGCGACAACGATTAACGATTGCGAGAGCGTTATTATCACCCGCTCAAGTC
TTGATATTTGATGAGTCGACGAGTGGACTGGATGCAATTACTGAAAAACAATTAATCGATAATTTAGTGGCAATGACTGA
CAAGACGATTATTTTTATTGCCCACCGGTTGTCGATTGCAAAGCGGACGAATCATATCATCGTTCTGCATGATGGTCGGG
TCGCTGAAGAGGGGACCCATGCGGCATTGTTGAATGAACATGGTTACTATTACGACTTGATCAATAGCTGA

Domains

Predicted by InterproScan.

• ABC transporter transmembrane region (ABC_membrane) (166-436)

• Peptidase C39 family (Peptidase_C39) (5-140)

• ABC transporter (ABC_tran) (498-648)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis NCTC 12261	59.046	99.581	0.588
comA	Streptococcus pneumoniae Rx1	58.766	99.581	0.585
comA	Streptococcus pneumoniae D39	58.766	99.581	0.585
comA	Streptococcus pneumoniae R6	58.766	99.581	0.585
comA	Streptococcus pneumoniae TIGR4	58.626	99.581	0.584
comA	Streptococcus mitis SK321	58.485	99.581	0.582
comA	Streptococcus gordonii str. Challis substr. CH1	57.242	100	0.574
comA/nlmT	Streptococcus mutans UA159	54.735	100	0.549