Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | Llc71_RS12620 | Genome accession | NZ_AP025520 |
| Coordinates | 2458756..2459256 (-) | Length | 166 a.a. |
| NCBI ID | WP_011677241.1 | Uniprot ID | A0A0M2ZSZ2 |
| Organism | Lactococcus cremoris strain 7-1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2453756..2464256
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Llc71_RS12595 (Llc71_25090) | gnd | 2454882..2455787 (-) | 906 | WP_021037990.1 | phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating) | - |
| Llc71_RS12600 (Llc71_25100) | - | 2456156..2457004 (+) | 849 | WP_011677238.1 | MurR/RpiR family transcriptional regulator | - |
| Llc71_RS12605 (Llc71_25110) | - | 2457043..2457351 (+) | 309 | WP_011836103.1 | DUF960 domain-containing protein | - |
| Llc71_RS12610 (Llc71_25120) | - | 2457423..2458208 (-) | 786 | WP_046125098.1 | metallophosphoesterase | - |
| Llc71_RS12615 (Llc71_25130) | rpsR | 2458339..2458584 (-) | 246 | WP_003131952.1 | 30S ribosomal protein S18 | - |
| Llc71_RS12620 (Llc71_25140) | ssb | 2458756..2459256 (-) | 501 | WP_011677241.1 | single-stranded DNA-binding protein | Machinery gene |
| Llc71_RS12625 (Llc71_25150) | rpsF | 2459286..2459579 (-) | 294 | WP_011677242.1 | 30S ribosomal protein S6 | - |
| Llc71_RS12630 (Llc71_25160) | - | 2459773..2460627 (-) | 855 | WP_248536788.1 | undecaprenyl-diphosphate phosphatase | - |
| Llc71_RS12635 (Llc71_25170) | - | 2461149..2462615 (+) | 1467 | WP_042748546.1 | amino acid permease | - |
Sequence
Protein
Download Length: 166 a.a. Molecular weight: 18233.05 Da Isoelectric Point: 5.2166
>NTDB_id=92536 Llc71_RS12620 WP_011677241.1 2458756..2459256(-) (ssb) [Lactococcus cremoris strain 7-1]
MINNVVLVGRITRDPELRYTPQNQAVATFSLAVNRQFKNANGEREADFINCVIWRQQAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADSFQMLESRSARDGMGGGASAGSYSAPSQSTNNTPRPQTNNNSATPNFGRDADPFGSSPMEIS
DDDLPF
MINNVVLVGRITRDPELRYTPQNQAVATFSLAVNRQFKNANGEREADFINCVIWRQQAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADSFQMLESRSARDGMGGGASAGSYSAPSQSTNNTPRPQTNNNSATPNFGRDADPFGSSPMEIS
DDDLPF
Nucleotide
Download Length: 501 bp
>NTDB_id=92536 Llc71_RS12620 WP_011677241.1 2458756..2459256(-) (ssb) [Lactococcus cremoris strain 7-1]
ATGATTAACAATGTTGTATTAGTGGGACGCATTACTCGCGATCCTGAACTTCGTTACACCCCTCAAAATCAAGCTGTTGC
AACTTTTTCATTGGCTGTAAATCGTCAATTTAAAAATGCTAACGGTGAACGTGAGGCTGATTTCATTAACTGCGTTATTT
GGCGCCAACAAGCTGAAAATTTGGCAAATTGGGCTAAAAAAGGAGCTTTGATCGGTGTAACTGGTCGAATTCAAACACGT
AATTATGAAAATCAACAAGGTCAACGCGTTTATGTGACTGAGGTTGTGGCTGATAGTTTCCAAATGTTGGAAAGTAGATC
TGCTCGCGATGGTATGGGAGGCGGAGCTTCTGCCGGTTCATATTCTGCACCAAGCCAATCTACAAATAATACTCCACGTC
CACAAACGAATAATAATAGTGCAACACCGAATTTCGGTCGTGATGCTGACCCATTTGGTAGCTCACCTATGGAAATCTCG
GATGATGATCTTCCATTCTAA
ATGATTAACAATGTTGTATTAGTGGGACGCATTACTCGCGATCCTGAACTTCGTTACACCCCTCAAAATCAAGCTGTTGC
AACTTTTTCATTGGCTGTAAATCGTCAATTTAAAAATGCTAACGGTGAACGTGAGGCTGATTTCATTAACTGCGTTATTT
GGCGCCAACAAGCTGAAAATTTGGCAAATTGGGCTAAAAAAGGAGCTTTGATCGGTGTAACTGGTCGAATTCAAACACGT
AATTATGAAAATCAACAAGGTCAACGCGTTTATGTGACTGAGGTTGTGGCTGATAGTTTCCAAATGTTGGAAAGTAGATC
TGCTCGCGATGGTATGGGAGGCGGAGCTTCTGCCGGTTCATATTCTGCACCAAGCCAATCTACAAATAATACTCCACGTC
CACAAACGAATAATAATAGTGCAACACCGAATTTCGGTCGTGATGCTGACCCATTTGGTAGCTCACCTATGGAAATCTCG
GATGATGATCTTCCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.884 |
100 |
0.62 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
56.395 |
100 |
0.584 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
63.855 |
0.373 |
| ssb | Glaesserella parasuis strain SC1401 |
33.898 |
100 |
0.361 |