Detailed information NTG0925199

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: AB5J56_RS29560
• Genome accession: NZ_CP163435
• Coordinates: 6624602..6625888 (+)
• Length: 428 a.a.
• NCBI ID: WP_369236756.1
• Uniprot ID: -
• Organism: Streptomyces sp. R21
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6619602..6630888

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB5J56_RS29545 (AB5J56_29545)	tig	6621257..6622648 (+)	1392	WP_369236752.1	trigger factor	-
AB5J56_RS29550 (AB5J56_29550)	clpP	6623070..6623675 (+)	606	WP_369242877.1	ATP-dependent Clp protease proteolytic subunit	Regulator
AB5J56_RS29555 (AB5J56_29555)	clpP	6623761..6624441 (+)	681	WP_369236754.1	ATP-dependent Clp protease proteolytic subunit	Regulator
AB5J56_RS29560 (AB5J56_29560)	clpX	6624602..6625888 (+)	1287	WP_369236756.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
AB5J56_RS29565 (AB5J56_29565)	-	6626471..6627430 (-)	960	WP_369236758.1	hypothetical protein	-
AB5J56_RS29570 (AB5J56_29570)	-	6627567..6630197 (+)	2631	WP_369236760.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46752.60 Da
• Isoelectric Point: 4.8160

>NTDB_id=925199 AB5J56_RS29560 WP_369236756.1 6624602..6625888(+) (clpX) [Streptomyces sp. R21]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIFEFLEGYVVGQDA
AKKALSVAVYNHYKRVQAGENGGGQSREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKLELQSKDQFGDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
ADVVHSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=925199 AB5J56_RS29560 WP_369236756.1 6624602..6625888(+) (clpX) [Streptomyces sp. R21]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAGACGA
GCGAGGTGCGCTGGGAGGAACTTCCCAAGCCCCGCGAGATCTTCGAGTTCCTGGAGGGCTACGTAGTCGGCCAGGACGCG
GCCAAGAAGGCCCTCTCAGTCGCGGTGTACAACCACTACAAGCGGGTTCAAGCCGGTGAGAACGGCGGCGGTCAAAGCCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTGCTGCTGGGCCCCACGGGTTCGGGCAAGACGCTGCTGGCCCAGA
CTCTGGCCCGCATGCTCAACGTCCCCTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCGGGCTATGTGGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTCATCCAGGCCGCTGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCGAGGAAGAGTGAAAACCCCTCCATCACGCGCGACGTGTCGGGCGAGGGCGTCCAGCAGGCCC
TCCTGAAGATCCTCGAGGGCACGACGGCGTCCGTGCCCCCGCAGGGCGGGCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCTCGGGCCTGGAGAAGATCATCGAGTCCCGGGCCGGCGC
GAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCTGGAGCTGCAGTCCAAGGACCAGTTCGGTGACGTCATGCCCG
AGGACCTGGTCAAGTTCGGCATGATCCCGGAGTTCATCGGCCGTCTCCCGGTCATCACCTCGGTGCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCATCGAGCCGCGCAACGCGCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGCGAGGCCCTCGAAGCCATCGCCGACCAGGCGATCCTCCGCCAGACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAAGAAGTCCTCATGTCCGTGATGTACGAGGTCCCGTCCCGCAAGGACGTCGCCCGAGTCGTCATCACG
GCGGACGTCGTCCACTCGAACGTGAACCCGACGCTGATTCCGCGGGATGCGCGGGGGCGGGGTCCTGGGGAGCAGAAGAC
GGCCTGA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.433	93.925	0.596
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521