Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   VKP38_RS05815 Genome accession   NZ_CP142352
Coordinates   1144304..1144498 (-) Length   64 a.a.
NCBI ID   WP_032464308.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain 2907-97     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1139304..1149498
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VKP38_RS05795 (VKP38_05795) - 1141110..1142318 (-) 1209 WP_032464310.1 CCA tRNA nucleotidyltransferase -
  VKP38_RS05800 (VKP38_05800) - 1142443..1143291 (-) 849 WP_011054370.1 DegV family protein -
  VKP38_RS05805 (VKP38_05805) - 1143291..1143671 (-) 381 WP_002985011.1 DUF1149 family protein -
  VKP38_RS05810 (VKP38_05810) - 1143899..1144075 (-) 177 WP_032464309.1 hypothetical protein -
  VKP38_RS05815 (VKP38_05815) prx 1144304..1144498 (-) 195 WP_032464308.1 hypothetical protein Regulator
  VKP38_RS05820 (VKP38_05820) - 1144560..1145585 (+) 1026 WP_032464307.1 IdeS/Mac family cysteine endopeptidase -
  VKP38_RS05825 (VKP38_05825) - 1145698..1145970 (+) 273 WP_371397360.1 exotoxin beta-grasp domain-containing protein -
  VKP38_RS05830 (VKP38_05830) - 1146195..1146485 (+) 291 Protein_1095 IS3 family transposase -
  VKP38_RS05835 (VKP38_05835) - 1146542..1147249 (-) 708 WP_002990206.1 glycoside hydrolase family 73 protein -
  VKP38_RS05840 (VKP38_05840) - 1147401..1148000 (-) 600 WP_326605826.1 glycoside hydrolase family 73 protein -

Sequence

Protein


Download         Length: 64 a.a.        Molecular weight: 7640.82 Da        Isoelectric Point: 5.8375

>NTDB_id=925111 VKP38_RS05815 WP_032464308.1 1144304..1144498(-) (prx) [Streptococcus pyogenes strain 2907-97]
MQFFKIIFNKRKQAIDNGDITRDTVVVVLKNGRFFDDMLLHEEVSNRRAVIEEREEEALMKLDK

Nucleotide


Download         Length: 195 bp        

>NTDB_id=925111 VKP38_RS05815 WP_032464308.1 1144304..1144498(-) (prx) [Streptococcus pyogenes strain 2907-97]
TTGCAATTTTTTAAAATAATATTTAATAAACGTAAACAAGCGATTGACAATGGAGATATCACAAGAGACACAGTAGTGGT
TGTGCTTAAAAATGGACGGTTTTTTGATGATATGTTGCTGCATGAGGAAGTGAGCAATAGGAGAGCTGTGATAGAAGAAA
GAGAGGAAGAAGCGTTGATGAAATTAGACAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

52.542

92.188

0.484
  prx Streptococcus pyogenes MGAS315

50.847

92.188

0.469
  prx Streptococcus pyogenes MGAS8232

45.763

92.188

0.422
  prx Streptococcus pyogenes MGAS315

44.068

92.188

0.406