Detailed information NTG0925007

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: AB5J55_RS14210
• Genome accession: NZ_CP163432
• Coordinates: 3134483..3135769 (-)
• Length: 428 a.a.
• NCBI ID: WP_369271031.1
• Uniprot ID: -
• Organism: Streptomyces sp. R11
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3129483..3140769

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB5J55_RS14200 (AB5J55_14200)	-	3130663..3133287 (-)	2625	WP_369271029.1	valine--tRNA ligase	-
AB5J55_RS14205 (AB5J55_14205)	-	3133424..3134413 (+)	990	WP_369271030.1	hypothetical protein	-
AB5J55_RS14210 (AB5J55_14210)	clpX	3134483..3135769 (-)	1287	WP_369271031.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
AB5J55_RS14215 (AB5J55_14215)	clpP	3135950..3136630 (-)	681	WP_369271032.1	ATP-dependent Clp protease proteolytic subunit	Regulator
AB5J55_RS14220 (AB5J55_14220)	clpP	3136701..3137306 (-)	606	WP_328430572.1	ATP-dependent Clp protease proteolytic subunit	Regulator
AB5J55_RS14225 (AB5J55_14225)	tig	3137578..3138972 (-)	1395	WP_369271033.1	trigger factor	-
AB5J55_RS14240 (AB5J55_14240)	-	3139527..3140660 (-)	1134	WP_369271034.1	tyrosine-type recombinase/integrase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46829.64 Da
• Isoelectric Point: 4.7360

>NTDB_id=925007 AB5J55_RS14210 WP_369271031.1 3134483..3135769(-) (clpX) [Streptomyces sp. R11]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGGQSREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKRELEAKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
ADVVQSNVNPTLIPRDARGRGPGEQKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=925007 AB5J55_RS14210 WP_369271031.1 3134483..3135769(-) (clpX) [Streptomyces sp. R11]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCTGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAGCTCGCGGAGACCA
GTGAGGTCCGCTGGGAGGAACTGCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGCTATGTGGTCGGCCAGGAAGCG
GCCAAGAAGGCGCTCTCCGTCGCCGTCTACAACCACTACAAGCGTGTGCAGGCCGGCGAGAACGGCGGCGGTCAAAGCCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTGCTCGCCCAGA
CCCTGGCCCGCATGCTGAACGTCCCCTTCGCCATCGCGGACGCGACGGCGCTGACGGAGGCCGGGTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCGGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGGAAGAGCGAAAACCCCTCGATCACGCGTGACGTGTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACGGCCTCGGTCCCGCCGCAGGGCGGCCGTAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCGTTCGCGGGCCTGGAGAAGATCATCGAGTCCCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGCGAGCTGGAGGCCAAGGACCAGTTCGAGGACGTCATGCCGG
AGGACCTCGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGCCTCCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCGTCGAGCCCCGCAATGCGCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAGGAGGTCCTGATGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGGGTCGTCATCACG
GCCGACGTCGTTCAGTCGAACGTGAACCCGACCCTGATCCCGCGGGACGCGCGGGGCCGCGGGCCGGGCGAGCAGAAGTC
GGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.687	93.925	0.589
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.501	96.028	0.523