Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | OCV49_RS01170 | Genome accession | NZ_AP025499 |
| Coordinates | 258973..259491 (+) | Length | 172 a.a. |
| NCBI ID | WP_076668786.1 | Uniprot ID | A0A4U2AFG0 |
| Organism | Vibrio lentus strain LMG 21034 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 253973..264491
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OCV49_RS01150 | - | 254049..256607 (-) | 2559 | WP_065104131.1 | PBP1A family penicillin-binding protein | - |
| OCV49_RS01155 | pilM | 256759..257784 (+) | 1026 | WP_102296354.1 | type IV pilus assembly protein PilM | Machinery gene |
| OCV49_RS01160 | pilN | 257768..258382 (+) | 615 | WP_192853348.1 | PilN domain-containing protein | Machinery gene |
| OCV49_RS01165 | pilO | 258375..258986 (+) | 612 | WP_192853349.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| OCV49_RS01170 | pilP | 258973..259491 (+) | 519 | WP_076668786.1 | pilus assembly protein PilP | Machinery gene |
| OCV49_RS01175 | pilQ | 259551..261245 (+) | 1695 | WP_102279228.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| OCV49_RS01180 | aroK | 261422..261940 (+) | 519 | WP_004729664.1 | shikimate kinase AroK | - |
| OCV49_RS01185 | aroB | 261967..263055 (+) | 1089 | WP_192853350.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 19248.47 Da Isoelectric Point: 10.7333
>NTDB_id=92173 OCV49_RS01170 WP_076668786.1 258973..259491(+) (pilP) [Vibrio lentus strain LMG 21034]
MKLNRALCSTLLLLVLTGCKANQDSLEDFVVQVETKAKKEVEQLVPATEFVAANYQRRAFRPPFELPKEAIVQNQPLVKK
DCWQPSARSRNGKLEKYPLSKLRLRGVMGSGSSVFGLVQTPRGNVVNVKKGQFIGLNNGRVTKVTSQYVQINETLPDGLG
CWHKRNVRLALK
MKLNRALCSTLLLLVLTGCKANQDSLEDFVVQVETKAKKEVEQLVPATEFVAANYQRRAFRPPFELPKEAIVQNQPLVKK
DCWQPSARSRNGKLEKYPLSKLRLRGVMGSGSSVFGLVQTPRGNVVNVKKGQFIGLNNGRVTKVTSQYVQINETLPDGLG
CWHKRNVRLALK
Nucleotide
Download Length: 519 bp
>NTDB_id=92173 OCV49_RS01170 WP_076668786.1 258973..259491(+) (pilP) [Vibrio lentus strain LMG 21034]
ATGAAACTCAATAGAGCGTTGTGTTCAACCTTGTTACTGCTCGTGCTGACGGGCTGTAAAGCCAATCAAGATTCGTTAGA
AGATTTTGTGGTGCAAGTTGAAACCAAAGCAAAAAAAGAGGTCGAGCAGCTTGTCCCAGCAACGGAATTTGTAGCCGCTA
ACTATCAGCGAAGAGCATTTCGCCCTCCCTTTGAACTTCCCAAAGAAGCCATTGTGCAAAACCAACCTTTGGTTAAGAAA
GACTGTTGGCAACCAAGCGCACGCTCTCGAAATGGCAAGCTAGAGAAGTACCCGCTGAGTAAGCTGCGTTTAAGAGGCGT
GATGGGCAGTGGCTCCAGTGTGTTTGGTTTAGTGCAAACGCCAAGGGGCAATGTGGTGAATGTGAAGAAGGGCCAGTTTA
TCGGCCTCAATAATGGCCGAGTGACTAAGGTGACGAGCCAGTACGTTCAGATTAATGAAACTCTTCCAGATGGCTTAGGT
TGTTGGCATAAGCGCAACGTTAGGCTGGCTCTGAAGTAA
ATGAAACTCAATAGAGCGTTGTGTTCAACCTTGTTACTGCTCGTGCTGACGGGCTGTAAAGCCAATCAAGATTCGTTAGA
AGATTTTGTGGTGCAAGTTGAAACCAAAGCAAAAAAAGAGGTCGAGCAGCTTGTCCCAGCAACGGAATTTGTAGCCGCTA
ACTATCAGCGAAGAGCATTTCGCCCTCCCTTTGAACTTCCCAAAGAAGCCATTGTGCAAAACCAACCTTTGGTTAAGAAA
GACTGTTGGCAACCAAGCGCACGCTCTCGAAATGGCAAGCTAGAGAAGTACCCGCTGAGTAAGCTGCGTTTAAGAGGCGT
GATGGGCAGTGGCTCCAGTGTGTTTGGTTTAGTGCAAACGCCAAGGGGCAATGTGGTGAATGTGAAGAAGGGCCAGTTTA
TCGGCCTCAATAATGGCCGAGTGACTAAGGTGACGAGCCAGTACGTTCAGATTAATGAAACTCTTCCAGATGGCTTAGGT
TGTTGGCATAAGCGCAACGTTAGGCTGGCTCTGAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Vibrio cholerae strain A1552 |
64.375 |
93.023 |
0.599 |
| pilP | Vibrio campbellii strain DS40M4 |
53.846 |
98.256 |
0.529 |