Detailed information NTG0921555

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: VP461_RS17460
• Genome accession: NZ_CP142100
• Coordinates: 3706532..3707590 (+)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain A20AB13
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3701532..3712590

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VP461_RS17445 (VP461_17445)	-	3702637..3702969 (+)	333	WP_000169594.1	hypothetical protein	-
VP461_RS17450 (VP461_17450)	-	3702972..3703796 (+)	825	WP_002019666.1	putative RNA methyltransferase	-
VP461_RS17455 (VP461_17455)	ponA	3703814..3706369 (-)	2556	WP_000736677.1	penicillin-binding protein PBP1a	-
VP461_RS17460 (VP461_17460)	pilM	3706532..3707590 (+)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
VP461_RS17465 (VP461_17465)	pilN	3707590..3708231 (+)	642	WP_000201227.1	PilN domain-containing protein	Machinery gene
VP461_RS17470 (VP461_17470)	pilO	3708228..3708968 (+)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
VP461_RS17475 (VP461_17475)	pilP	3708979..3709506 (+)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
VP461_RS17480 (VP461_17480)	pilQ	3709574..3711739 (+)	2166	WP_001017033.1	type IV pilus secretin PilQ family protein	Machinery gene
VP461_RS17485 (VP461_17485)	aroK	3711751..3712320 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=921555 VP461_RS17460 WP_002014066.1 3706532..3707590(+) (pilM) [Acinetobacter baumannii strain A20AB13]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=921555 VP461_RS17460 WP_002014066.1 3706532..3707590(+) (pilM) [Acinetobacter baumannii strain A20AB13]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCCGATCGTCTTG
CGAATCCAAATCGTGTAAATGTACTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGCCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTCTTTGGTGGCAAGCAACTTACGCTTGAAATTCAAAGTCGTTATGGCTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTAGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423