Detailed information NTG0921535

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: VP461_RS11455
• Genome accession: NZ_CP142100
• Coordinates: 2443450..2444568 (+)
• Length: 372 a.a.
• NCBI ID: WP_000347039.1
• Uniprot ID: A0A9P2XLL8
• Organism: Acinetobacter baumannii strain A20AB13
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2438450..2449568

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VP461_RS11445 (VP461_11445)	-	2441566..2442258 (-)	693	WP_001108512.1	YggS family pyridoxal phosphate-dependent enzyme	-
VP461_RS11450 (VP461_11450)	pilT	2442385..2443422 (+)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
VP461_RS11455 (VP461_11455)	pilU	2443450..2444568 (+)	1119	WP_000347039.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
VP461_RS11460 (VP461_11460)	fur	2444638..2445075 (-)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
VP461_RS11465 (VP461_11465)	-	2445187..2445585 (+)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
VP461_RS11470 (VP461_11470)	-	2445640..2445963 (-)	324	WP_000442587.1	RnfH family protein	-
VP461_RS11475 (VP461_11475)	-	2445963..2447030 (-)	1068	WP_002019572.1	hypothetical protein	-
VP461_RS11480 (VP461_11480)	-	2447183..2447638 (-)	456	WP_000782976.1	bacteriohemerythrin	-
VP461_RS11485 (VP461_11485)	-	2447891..2448739 (-)	849	WP_000336548.1	class II glutamine amidotransferase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41933.13 Da
• Isoelectric Point: 6.6944

>NTDB_id=921535 VP461_RS11455 WP_000347039.1 2443450..2444568(+) (pilU) [Acinetobacter baumannii strain A20AB13]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRREFAETRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=921535 VP461_RS11455 WP_000347039.1 2443450..2444568(+) (pilU) [Acinetobacter baumannii strain A20AB13]
ATGGATTTTAATGACTTGCTCAACCTGATGGTTGAAAAAAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAACGGGCAAATTGTTCCAATTTCAAAAAACAGTCTTTCTGGGGAAGTGATTGGTCAACTGTTACATTCCA
TCATGAGTGAAAAACAACGCAGAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTTGTAGGCGCGACAG
GCACAGGTAAATCTACTTCACTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCTAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCAGATGAAGGTCCTGATCAATTATCAGACGGGAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (31-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.926	100	0.772
pilU	Pseudomonas stutzeri DSM 10701	69.565	98.925	0.688
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.486	93.011	0.395