Detailed information NTG0921147

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: VOF86_RS02015
• Genome accession: NZ_CP142026
• Coordinates: 432356..433504 (+)
• Length: 382 a.a.
• NCBI ID: WP_003100959.1
• Uniprot ID: G3XCX3
• Organism: Pseudomonas aeruginosa strain L3
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 427356..438504

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VOF86_RS01990 (VOF86_01990)	-	428507..428803 (-)	297	WP_031628111.1	DUF167 domain-containing protein	-
VOF86_RS01995 (VOF86_01995)	-	428800..429393 (-)	594	WP_003084544.1	YggT family protein	-
VOF86_RS02000 (VOF86_02000)	proC	429404..430225 (-)	822	WP_003084546.1	pyrroline-5-carboxylate reductase	-
VOF86_RS02005 (VOF86_02005)	-	430237..430929 (-)	693	WP_010793543.1	YggS family pyridoxal phosphate-dependent enzyme	-
VOF86_RS02010 (VOF86_02010)	pilT	431144..432178 (+)	1035	WP_003084552.1	type IV pilus twitching motility protein PilT	Machinery gene
VOF86_RS02015 (VOF86_02015)	pilU	432356..433504 (+)	1149	WP_003100959.1	type IV pilus ATPase PilU	Machinery gene
VOF86_RS02020 (VOF86_02020)	czcD	433512..434411 (-)	900	WP_003100957.1	CDF family zinc transporter CzcD	-
VOF86_RS02025 (VOF86_02025)	-	434565..434969 (+)	405	WP_003084560.1	NINE protein	-
VOF86_RS02030 (VOF86_02030)	-	435212..436585 (+)	1374	WP_109504908.1	pyridoxal-phosphate dependent enzyme	-
VOF86_RS02035 (VOF86_02035)	-	436582..437766 (+)	1185	WP_003100953.1	cystathionine gamma-synthase	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 42532.81 Da
• Isoelectric Point: 6.7792

>NTDB_id=921147 VOF86_RS02015 WP_003100959.1 432356..433504(+) (pilU) [Pseudomonas aeruginosa strain L3]
MEFEKLLRLMVEKGGSDLFITAGVPPSMKVNGRVMPVTKTPLSPEQTRETVLGVMNEQQRRDFAENHECNFAISARGIGR
FRVSAFYQRNLVGMVLRRIETNIPTLEELKLPEILKKLALTKRGLVIFVGATGTGKSTSLAAMIGYRNKNSTGHIISIED
PIEYIHQHQGCIVTQREVGLDTDSFEVALKNTLRQAPDVIMIGEVRSRETMDHAVAFAETGHLCLATLHANNANQALERI
IHFFPADRHGQVWMDLSLNLKAIVAQQLVPTPDGKGRRAVIEVLLNTPLAADLIRKGEVHELKPLMKRSTEQGMQTFDQA
LYQLYTQGEITYEDALAHADSANDLRLMIKLGSESDADHLSSLTQGLSLEITDDDPAGRRFR

Nucleotide

• Length: 1149 bp

>NTDB_id=921147 VOF86_RS02015 WP_003100959.1 432356..433504(+) (pilU) [Pseudomonas aeruginosa strain L3]
ATGGAATTCGAAAAGCTGCTGCGCCTGATGGTGGAAAAGGGCGGCTCCGACCTGTTCATCACCGCCGGCGTACCGCCGTC
GATGAAGGTCAACGGCCGGGTGATGCCGGTGACCAAGACGCCGCTGTCGCCGGAGCAGACCCGCGAGACCGTGCTAGGCG
TGATGAACGAGCAGCAGCGCCGCGATTTCGCCGAGAACCATGAGTGCAACTTCGCCATCAGCGCCCGCGGCATCGGCCGC
TTCCGGGTCAGTGCCTTCTACCAGCGCAACCTGGTGGGCATGGTATTGCGCCGGATCGAGACCAACATCCCGACCCTGGA
AGAGCTGAAGCTCCCGGAAATCCTCAAGAAGCTGGCGCTGACCAAGCGCGGCCTGGTGATCTTCGTCGGCGCCACCGGCA
CCGGCAAGTCCACCTCGCTGGCGGCGATGATCGGCTACCGCAACAAGAACTCCACCGGGCACATCATCTCCATCGAGGAC
CCGATCGAGTACATCCACCAGCACCAGGGCTGCATCGTCACCCAGCGCGAGGTGGGGCTGGACACCGACTCCTTCGAGGT
GGCGCTGAAGAACACCCTGCGCCAGGCGCCGGACGTGATCATGATCGGCGAGGTGCGCTCGCGGGAGACCATGGACCACG
CCGTGGCCTTCGCCGAGACCGGCCACCTGTGCCTGGCGACCCTGCACGCGAACAACGCCAACCAGGCGCTGGAGCGGATC
ATCCACTTCTTCCCGGCCGACCGTCATGGCCAGGTGTGGATGGACCTGTCGCTGAACCTCAAGGCCATCGTCGCCCAGCA
ACTGGTGCCGACCCCCGACGGCAAGGGGCGGCGGGCGGTGATCGAGGTGCTGCTGAACACCCCGCTGGCCGCCGACCTGA
TCCGCAAGGGCGAGGTGCACGAGCTGAAGCCGCTGATGAAGCGCTCCACCGAGCAGGGCATGCAGACCTTCGACCAGGCG
CTGTACCAGCTCTACACCCAGGGCGAGATCACCTACGAGGACGCCCTGGCCCACGCCGACTCGGCCAACGACCTGCGCCT
GATGATCAAGCTCGGTTCGGAAAGCGACGCCGACCACCTGTCGAGCCTGACCCAGGGCCTGAGCCTGGAAATCACCGACG
ACGACCCTGCCGGCCGGCGCTTCCGCTGA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (111-270)

3D structure

• AlphaFold DB: G3XCX3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	88.482	100	0.885
pilU	Acinetobacter baylyi ADP1	65.266	93.455	0.61
pilU	Vibrio cholerae strain A1552	60.286	91.623	0.552
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	43.068	88.743	0.382