Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | OCV56_RS14730 | Genome accession | NZ_AP025492 |
| Coordinates | 3273022..3273540 (-) | Length | 172 a.a. |
| NCBI ID | WP_086715781.1 | Uniprot ID | A0A5M9NFW9 |
| Organism | Vibrio gigantis strain LMG 22741 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3268022..3278540
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OCV56_RS14715 | aroB | 3269459..3270547 (-) | 1089 | WP_086715777.1 | 3-dehydroquinate synthase | - |
| OCV56_RS14720 | aroK | 3270573..3271091 (-) | 519 | WP_009848907.1 | shikimate kinase AroK | - |
| OCV56_RS14725 | pilQ | 3271268..3272962 (-) | 1695 | WP_190960479.1 | type IV pilus secretin PilQ | Machinery gene |
| OCV56_RS14730 | pilP | 3273022..3273540 (-) | 519 | WP_086715781.1 | pilus assembly protein PilP | Machinery gene |
| OCV56_RS14735 | pilO | 3273527..3274138 (-) | 612 | WP_086715787.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| OCV56_RS14740 | pilN | 3274131..3274730 (-) | 600 | WP_086715791.1 | PilN domain-containing protein | Machinery gene |
| OCV56_RS14745 | pilM | 3274714..3275739 (-) | 1026 | WP_086715793.1 | type IV pilus assembly protein PilM | Machinery gene |
| OCV56_RS14750 | - | 3275891..3278449 (+) | 2559 | WP_167373191.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 19187.28 Da Isoelectric Point: 10.6605
>NTDB_id=92110 OCV56_RS14730 WP_086715781.1 3273022..3273540(-) (pilP) [Vibrio gigantis strain LMG 22741]
MKSNSAFYSIVLLLALSGCKANQDSLEDFVVQVEAKARKDVEQLVPATEFLAATYQRRAFRPPFELPKEAIVQNQPLVKK
DCWQPSARSRNGKLEKYPLSKLRLRGVMGSGSNVFGLVQTPKGNVVNVKKGQFIGLNNGRVTKVTSQYVQINETLPDGLG
CWHKRNVRLALK
MKSNSAFYSIVLLLALSGCKANQDSLEDFVVQVEAKARKDVEQLVPATEFLAATYQRRAFRPPFELPKEAIVQNQPLVKK
DCWQPSARSRNGKLEKYPLSKLRLRGVMGSGSNVFGLVQTPKGNVVNVKKGQFIGLNNGRVTKVTSQYVQINETLPDGLG
CWHKRNVRLALK
Nucleotide
Download Length: 519 bp
>NTDB_id=92110 OCV56_RS14730 WP_086715781.1 3273022..3273540(-) (pilP) [Vibrio gigantis strain LMG 22741]
ATGAAATCCAATAGCGCGTTTTATTCAATCGTGTTGCTGCTTGCACTGTCAGGCTGCAAAGCCAATCAAGATTCACTCGA
AGACTTTGTGGTGCAGGTTGAAGCCAAGGCGAGAAAAGACGTCGAGCAACTTGTCCCTGCGACTGAATTCTTGGCTGCGA
CTTATCAGCGCCGAGCCTTTCGTCCTCCCTTTGAGCTTCCCAAAGAAGCCATTGTGCAAAATCAGCCTTTGGTTAAGAAA
GATTGTTGGCAACCGAGCGCTCGCTCTCGTAACGGCAAGTTAGAAAAGTACCCACTCAGCAAGTTGCGTTTGAGAGGCGT
GATGGGCAGTGGGTCAAATGTGTTTGGGCTAGTGCAAACACCGAAAGGCAACGTGGTAAACGTCAAGAAAGGCCAGTTTA
TCGGCTTAAACAATGGCCGAGTTACTAAGGTGACGAGCCAGTACGTTCAGATTAATGAAACTCTTCCAGACGGCTTAGGT
TGTTGGCATAAGCGCAACGTTAGGCTGGCTCTGAAGTAA
ATGAAATCCAATAGCGCGTTTTATTCAATCGTGTTGCTGCTTGCACTGTCAGGCTGCAAAGCCAATCAAGATTCACTCGA
AGACTTTGTGGTGCAGGTTGAAGCCAAGGCGAGAAAAGACGTCGAGCAACTTGTCCCTGCGACTGAATTCTTGGCTGCGA
CTTATCAGCGCCGAGCCTTTCGTCCTCCCTTTGAGCTTCCCAAAGAAGCCATTGTGCAAAATCAGCCTTTGGTTAAGAAA
GATTGTTGGCAACCGAGCGCTCGCTCTCGTAACGGCAAGTTAGAAAAGTACCCACTCAGCAAGTTGCGTTTGAGAGGCGT
GATGGGCAGTGGGTCAAATGTGTTTGGGCTAGTGCAAACACCGAAAGGCAACGTGGTAAACGTCAAGAAAGGCCAGTTTA
TCGGCTTAAACAATGGCCGAGTTACTAAGGTGACGAGCCAGTACGTTCAGATTAATGAAACTCTTCCAGACGGCTTAGGT
TGTTGGCATAAGCGCAACGTTAGGCTGGCTCTGAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Vibrio cholerae strain A1552 |
59.884 |
100 |
0.599 |
| pilP | Vibrio campbellii strain DS40M4 |
53.846 |
98.256 |
0.529 |