Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   VDS57_RS11875 Genome accession   NZ_CP141839
Coordinates   2250787..2251737 (+) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus subtilis strain PN1236     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2245787..2256737
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VDS57_RS11850 (VDS57_11850) rapC 2247246..2248394 (+) 1149 WP_017696151.1 response regulator aspartate phosphatase RapC Regulator
  VDS57_RS11855 (VDS57_11855) phrC 2248378..2248500 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  VDS57_RS11860 (VDS57_11860) yczM 2248600..2248689 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  VDS57_RS11865 (VDS57_11865) yczN 2248771..2248884 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  VDS57_RS11870 (VDS57_11870) thrD 2249038..2250402 (-) 1365 WP_033883679.1 aspartate kinase -
  VDS57_RS11875 (VDS57_11875) ceuB 2250787..2251737 (+) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  VDS57_RS11880 (VDS57_11880) yclO 2251730..2252677 (+) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  VDS57_RS11885 (VDS57_11885) yclP 2252671..2253429 (+) 759 WP_014475806.1 petrobactin ABC transporter ATP-binding protein YclP -
  VDS57_RS11890 (VDS57_11890) yclQ 2253451..2254404 (+) 954 WP_014478834.1 petrobactin ABC transporter substrate-binding protein YclQ -
  VDS57_RS11895 (VDS57_11895) - 2254634..2255230 (+) 597 WP_250615378.1 hypothetical protein -
  VDS57_RS11900 (VDS57_11900) - 2255303..2255566 (+) 264 WP_324271384.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=920159 VDS57_RS11875 WP_014475804.1 2250787..2251737(+) (ceuB) [Bacillus subtilis strain PN1236]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=920159 VDS57_RS11875 WP_014475804.1 2250787..2251737(+) (ceuB) [Bacillus subtilis strain PN1236]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TTGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCAGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525