Detailed information NTG0920105

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: VA212_RS07070
• Genome accession: NZ_CP141838
• Coordinates: 1449796..1451229 (+)
• Length: 477 a.a.
• NCBI ID: WP_324660332.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain P07928
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1444796..1456229

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VA212_RS07050	glmS	1445443..1447236 (-)	1794	WP_324660324.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
VA212_RS07055	-	1447237..1447476 (-)	240	WP_000461845.1	DUF2443 domain-containing protein	-
VA212_RS07060	-	1447512..1448054 (-)	543	WP_324660329.1	purine-nucleoside phosphorylase	-
VA212_RS07065	dnaA	1448207..1449574 (+)	1368	WP_324660330.1	chromosomal replication initiator protein DnaA	-
VA212_RS07070	comH	1449796..1451229 (+)	1434	WP_324660332.1	competence protein	Machinery gene
VA212_RS07080	-	1451407..1452159 (+)	753	WP_324660333.1	exodeoxyribonuclease III	-
VA212_RS07085	-	1452156..1452791 (-)	636	WP_324660335.1	outer membrane protein	-
VA212_RS07090	-	1452795..1453148 (-)	354	WP_096397332.1	hypothetical protein	-
VA212_RS07095	recG	1453230..1455095 (+)	1866	WP_324660337.1	ATP-dependent DNA helicase RecG	-

Sequence

Protein

• Length: 477 a.a.
• Molecular weight: 54705.57 Da
• Isoelectric Point: 7.1642

>NTDB_id=920105 VA212_RS07070 WP_324660332.1 1449796..1451229(+) (comH) [Helicobacter pylori strain P07928]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTVTHISTAIVYQPLDE
KLSLETILNPNRPTIPRNTQIVFSSKELKEPHQMPSLNAPIQKPQNKPTSSQQSPQNFSYSESKLGSKNPKNSLLQPLAT
PNKISSANEVKTPTNDTKPPLRHSSEDQENNLFVTPPTEKTLPNNTPNADTNEHNESNENRDNVEKQTIKDPNIKEFACG
KWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSNAENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFTILQARSS
TEKCKRARARKDGTTRQCYLIEEPLKQAWESEYQITTQLVKAVYERPKQDDQTELTFYETNELAYSSTRKSEVKQNELNL
NEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1434 bp

>NTDB_id=920105 VA212_RS07070 WP_324660332.1 1449796..1451229(+) (comH) [Helicobacter pylori strain P07928]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTGTCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGATCTTAAACCCTAACCGCCCTACTATTCCCAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGCCGCACCAAATGCCTTCTTTAAACGCGCCCATACAAAAACCACAAAACAAACCCACTTCATCGCAACAAT
CTCCTCAAAACTTCTCTTACTCAGAGTCCAAACTAGGCTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTAGCCACT
CCTAATAAAATAAGCTCCGCTAATGAAGTTAAAACGCCAACAAACGACACTAAACCCCCTTTAAGGCATTCTTCAGAAGA
TCAAGAAAACAACCTCTTTGTAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCCCTAACGCTGATACTAATGAAC
ACAATGAAAGCAATGAGAATAGGGATAATGTGGAAAAACAAACGATTAAAGATCCTAATATTAAAGAATTTGCGTGCGGG
AAGTGGGTCTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACAGACTGC
GACAGACATTACCCCTTGCGATTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAATCTCTG
TTCATAAAACAGAGCCTTTAGAAGAACCGCAAACTTTTGAAGCTAAAAACAATTTTACCATTCTCCAAGCCAGAAGCTCT
ACAGAAAAATGCAAAAGGGCCAGAGCGCGAAAAGACGGCACAACCAGGCAATGCTATCTCATAGAAGAGCCTTTAAAACA
AGCGTGGGAGAGCGAGTATCAAATCACCACGCAATTAGTGAAAGCTGTATATGAGCGCCCCAAACAAGACGATCAAACAG
AGCTGACTTTCTATGAAACCAACGAATTGGCTTATTCTTCCACACGAAAGAGTGAAGTTAAGCAAAATGAATTGAATTTG
AATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGAATACAA
AGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAGCTAAAA
GCACGCCCTTGAGTATTGAAAATTCTCGCGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	91.023	100	0.914